Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SNX3O60493 MIR302D-201ENST00000362275 68 ntBASIC1.45□□□□□ -2.18
SNX3O60493 Y_RNA.148-201ENST00000363557 117 ntBASIC1.45□□□□□ -2.18
SNX3O60493 Y_RNA.267-201ENST00000364679 109 ntBASIC1.45□□□□□ -2.18
SNX3O60493 Y_RNA.471-201ENST00000384312 102 ntBASIC1.45□□□□□ -2.18
SNX3O60493 Y_RNA.526-201ENST00000384572 110 ntBASIC1.45□□□□□ -2.18
SNX3O60493 Y_RNA.645-201ENST00000391229 102 ntBASIC1.45□□□□□ -2.18
SNX3O60493 RPEP5-201ENST00000441137 268 ntBASIC1.45□□□□□ -2.18
SNX3O60493 SNORA59A-201ENST00000459326 152 ntBASIC1.45□□□□□ -2.18
SNX3O60493 U8.20-201ENST00000459445 131 ntBASIC1.45□□□□□ -2.18
SNX3O60493 Y_RNA.631-201ENST00000459607 101 ntBASIC1.45□□□□□ -2.18
SNX3O60493 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.45□□□□□ -2.18
SNX3O60493 SNORA25.10-201ENST00000515926 124 ntBASIC1.45□□□□□ -2.18
SNX3O60493 RNU6-1337P-201ENST00000516525 95 ntBASIC1.45□□□□□ -2.18
SNX3O60493 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.45□□□□□ -2.18
SNX3O60493 BX248123.2-201ENST00000606318 124 ntBASIC1.45□□□□□ -2.18
SNX3O60493 PART1_1.1-201ENST00000611761 217 ntBASIC1.45□□□□□ -2.18
SNX3O60493 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SNX3O60493 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SNX3O60493 Y_RNA.28-201ENST00000362554 111 ntBASIC1.44□□□□□ -2.18
SNX3O60493 SNORD114-1-201ENST00000362705 72 ntBASIC1.44□□□□□ -2.18
SNX3O60493 SNORD1A-201ENST00000364968 72 ntBASIC1.44□□□□□ -2.18
SNX3O60493 Y_RNA.424-201ENST00000384063 103 ntBASIC1.44□□□□□ -2.18
SNX3O60493 RNU11-5P-201ENST00000391216 129 ntBASIC1.44□□□□□ -2.18
SNX3O60493 RNU6-130P-201ENST00000411112 103 ntBASIC1.44□□□□□ -2.18
SNX3O60493 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.44□□□□□ -2.18
SNX3O60493 STAG3L5P-204ENST00000443759 179 ntBASIC1.44□□□□□ -2.18
SNX3O60493 SNORA70.12-201ENST00000516084 153 ntBASIC1.44□□□□□ -2.18
SNX3O60493 RNU6-1291P-201ENST00000516591 104 ntBASIC1.44□□□□□ -2.18
SNX3O60493 RNU6-341P-201ENST00000516973 96 ntBASIC1.44□□□□□ -2.18
SNX3O60493 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.44□□□□□ -2.18
SNX3O60493 AC015688.6-201ENST00000577737 104 ntBASIC1.44□□□□□ -2.18
SNX3O60493 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SNX3O60493 Y_RNA.128-201ENST00000363391 112 ntBASIC1.43□□□□□ -2.18
SNX3O60493 Y_RNA.143-201ENST00000363520 106 ntBASIC1.43□□□□□ -2.18
SNX3O60493 RNU4-50P-201ENST00000364361 141 ntBASIC1.43□□□□□ -2.18
SNX3O60493 Y_RNA.439-201ENST00000384119 94 ntBASIC1.43□□□□□ -2.18
SNX3O60493 Y_RNA.462-201ENST00000384268 102 ntBASIC1.43□□□□□ -2.18
SNX3O60493 RNU6-937P-201ENST00000384325 106 ntBASIC1.43□□□□□ -2.18
SNX3O60493 SNORA40.18-201ENST00000391200 128 ntBASIC1.43□□□□□ -2.18
SNX3O60493 AL034345.1-201ENST00000407768 123 ntBASIC1.43□□□□□ -2.18
SNX3O60493 RNA5SP511-201ENST00000410487 115 ntBASIC1.43□□□□□ -2.18
SNX3O60493 RNU5A-5P-201ENST00000411054 116 ntBASIC1.43□□□□□ -2.18
SNX3O60493 RNU2-61P-201ENST00000411069 191 ntBASIC1.43□□□□□ -2.18
SNX3O60493 MTCO2P12-201ENST00000427426 682 ntBASIC1.43□□□□□ -2.18
SNX3O60493 HSPE1P13-201ENST00000451143 297 ntBASIC1.43□□□□□ -2.18
SNX3O60493 RNU1-41P-201ENST00000516161 162 ntBASIC1.43□□□□□ -2.18
SNX3O60493 RNU1-48P-201ENST00000516400 162 ntBASIC1.43□□□□□ -2.18
SNX3O60493 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.43□□□□□ -2.18
SNX3O60493 MIR4513-201ENST00000581077 86 ntBASIC1.43□□□□□ -2.18
SNX3O60493 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.43□□□□□ -2.18
SNX3O60493 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SNX3O60493 RNU6-1123P-201ENST00000362347 106 ntBASIC1.42□□□□□ -2.18
SNX3O60493 SNORA1B-201ENST00000362535 133 ntBASIC1.42□□□□□ -2.18
SNX3O60493 Y_RNA.172-201ENST00000363765 102 ntBASIC1.42□□□□□ -2.18
SNX3O60493 Y_RNA.329-201ENST00000365209 107 ntBASIC1.42□□□□□ -2.18
SNX3O60493 SNORD116-13-201ENST00000384408 92 ntBASIC1.42□□□□□ -2.18
SNX3O60493 MIR583-201ENST00000384846 75 ntBASIC1.42□□□□□ -2.18
SNX3O60493 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
SNX3O60493 MIR1323-201ENST00000408090 73 ntBASIC1.42□□□□□ -2.18
SNX3O60493 AC005042.3-201ENST00000453230 174 ntBASIC1.42□□□□□ -2.18
SNX3O60493 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.42□□□□□ -2.18
SNX3O60493 AL163540.1-201ENST00000485382 386 ntBASIC1.42□□□□□ -2.18
SNX3O60493 RNU6-970P-201ENST00000516312 107 ntBASIC1.42□□□□□ -2.18
SNX3O60493 RNU6-1096P-201ENST00000517089 102 ntBASIC1.42□□□□□ -2.18
SNX3O60493 AC015720.1-201ENST00000565251 277 ntBASIC1.42□□□□□ -2.18
SNX3O60493 AC104695.3-201ENST00000604052 296 ntBASIC1.42□□□□□ -2.18
SNX3O60493 AC124312.5-201ENST00000604451 268 ntBASIC1.42□□□□□ -2.18
SNX3O60493 MIR502-201ENST00000606349 86 ntBASIC1.42□□□□□ -2.18
SNX3O60493 MIR8081-201ENST00000611533 95 ntBASIC1.42□□□□□ -2.18
SNX3O60493 AC134503.1-201ENST00000633048 54 ntBASIC1.42□□□□□ -2.18
SNX3O60493 RNU6-450P-201ENST00000364654 107 ntBASIC1.41□□□□□ -2.18
SNX3O60493 Y_RNA.265-201ENST00000364677 108 ntBASIC1.41□□□□□ -2.18
SNX3O60493 Y_RNA.331-201ENST00000365267 102 ntBASIC1.41□□□□□ -2.18
SNX3O60493 SNORA22B-201ENST00000383876 138 ntBASIC1.41□□□□□ -2.18
SNX3O60493 MIR520G-201ENST00000385064 90 ntBASIC1.41□□□□□ -2.18
SNX3O60493 MIR513A1-201ENST00000385138 129 ntBASIC1.41□□□□□ -2.18
SNX3O60493 MIR548P-201ENST00000408336 84 ntBASIC1.41□□□□□ -2.18
SNX3O60493 RNU4-30P-201ENST00000410245 143 ntBASIC1.41□□□□□ -2.18
SNX3O60493 AL354751.2-201ENST00000415471 210 ntBASIC1.41□□□□□ -2.18
SNX3O60493 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.41□□□□□ -2.18
SNX3O60493 AC233266.1-201ENST00000454518 96 ntBASIC1.41□□□□□ -2.18
SNX3O60493 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
SNX3O60493 UBL5P3-201ENST00000475112 231 ntBASIC1.41□□□□□ -2.18
SNX3O60493 RNU2-56P-201ENST00000516826 190 ntBASIC1.41□□□□□ -2.18
SNX3O60493 RNU7-110P-201ENST00000516891 62 ntBASIC1.41□□□□□ -2.18
SNX3O60493 AC019176.1-201ENST00000518519 225 ntBASIC1.41□□□□□ -2.18
SNX3O60493 RNU6-988P-201ENST00000519081 107 ntBASIC1.41□□□□□ -2.18
SNX3O60493 SUMO2P16-201ENST00000519475 264 ntBASIC1.41□□□□□ -2.18
SNX3O60493 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.41□□□□□ -2.18
SNX3O60493 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
SNX3O60493 MIR4422-201ENST00000581938 83 ntBASIC1.41□□□□□ -2.18
SNX3O60493 AL162424.1-201ENST00000602325 221 ntBASIC1.41□□□□□ -2.18
SNX3O60493 AC011373.1-201ENST00000607270 237 ntBASIC1.41□□□□□ -2.18
SNX3O60493 AC242852.1-201ENST00000612151 96 ntBASIC1.41□□□□□ -2.18
SNX3O60493 AC244015.1-201ENST00000622301 99 ntBASIC1.41□□□□□ -2.18
SNX3O60493 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.41□□□□□ -2.18
SNX3O60493 SNORD81.1-201ENST00000363064 77 ntBASIC1.4□□□□□ -2.19
SNX3O60493 RNA5SP126-201ENST00000365092 109 ntBASIC1.4□□□□□ -2.19
SNX3O60493 SNORD63-201ENST00000384262 68 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms