Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LDB2O43679 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.02□□□□□ -2.09
LDB2O43679 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LDB2O43679 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LDB2O43679 Y_RNA.124-201ENST00000363339 93 ntBASIC2.02□□□□□ -2.09
LDB2O43679 SNORD114-6-201ENST00000364393 72 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNU6-740P-201ENST00000364734 105 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNU6-1318P-201ENST00000365389 103 ntBASIC2.02□□□□□ -2.09
LDB2O43679 MIR1253-201ENST00000408273 105 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RPS26P55-201ENST00000471178 356 ntBASIC2.02□□□□□ -2.09
LDB2O43679 AC011406.1-201ENST00000512440 370 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNU6-1146P-201ENST00000516282 102 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNA5SP137-201ENST00000516833 135 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNU6-111P-201ENST00000517179 105 ntBASIC2.02□□□□□ -2.09
LDB2O43679 RNU6-794P-201ENST00000517261 64 ntBASIC2.02□□□□□ -2.09
LDB2O43679 SUMO2P18-201ENST00000518873 252 ntBASIC2.02□□□□□ -2.09
LDB2O43679 AC027419.1-201ENST00000522976 328 ntBASIC2.02□□□□□ -2.09
LDB2O43679 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.02□□□□□ -2.09
LDB2O43679 MIR5089-201ENST00000580047 84 ntBASIC2.02□□□□□ -2.09
LDB2O43679 AC090425.1-201ENST00000610007 140 ntBASIC2.02□□□□□ -2.09
LDB2O43679 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.02□□□□□ -2.09
LDB2O43679 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
LDB2O43679 AC022202.1-201ENST00000613515 211 ntBASIC2.02□□□□□ -2.09
LDB2O43679 AC141273.2-201ENST00000618989 130 ntBASIC2.02□□□□□ -2.09
LDB2O43679 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.02□□□□□ -2.09
LDB2O43679 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.02□□□□□ -2.09
LDB2O43679 CENPCP1-201ENST00000533085 2578 ntBASIC2.02□□□□□ -2.09
LDB2O43679 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.02□□□□□ -2.09
LDB2O43679 Y_RNA.217-201ENST00000364214 105 ntBASIC2.01□□□□□ -2.09
LDB2O43679 RNU6-1164P-201ENST00000364428 107 ntBASIC2.01□□□□□ -2.09
LDB2O43679 RNU6-407P-201ENST00000365280 104 ntBASIC2.01□□□□□ -2.09
LDB2O43679 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
LDB2O43679 AC108059.2-201ENST00000434626 151 ntBASIC2.01□□□□□ -2.09
LDB2O43679 Y_RNA.641-201ENST00000459414 105 ntBASIC2.01□□□□□ -2.09
LDB2O43679 RNA5SP20-201ENST00000515976 84 ntBASIC2.01□□□□□ -2.09
LDB2O43679 AC002984.1-201ENST00000591692 448 ntBASIC2.01□□□□□ -2.09
LDB2O43679 AL031274.2-201ENST00000599419 203 ntBASIC2.01□□□□□ -2.09
LDB2O43679 AL353149.1-201ENST00000610667 244 ntBASIC2.01□□□□□ -2.09
LDB2O43679 AC078938.1-201ENST00000620993 318 ntBASIC2.01□□□□□ -2.09
LDB2O43679 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LDB2O43679 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
LDB2O43679 snoU2-30.2-201ENST00000362805 70 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.82-201ENST00000363000 102 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.92-201ENST00000363043 102 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.235-201ENST00000364412 102 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.257-201ENST00000364596 102 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.306-201ENST00000365015 102 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.312-201ENST00000365089 102 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.322-201ENST00000365151 102 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.368-201ENST00000365547 113 ntBASIC2□□□□□ -2.09
LDB2O43679 RNU6-338P-201ENST00000383888 105 ntBASIC2□□□□□ -2.09
LDB2O43679 RNU6-662P-201ENST00000384253 104 ntBASIC2□□□□□ -2.09
LDB2O43679 RNU6-1289P-201ENST00000384431 106 ntBASIC2□□□□□ -2.09
LDB2O43679 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2□□□□□ -2.09
LDB2O43679 RNU6-855P-201ENST00000410395 104 ntBASIC2□□□□□ -2.09
LDB2O43679 RNA5SP270-201ENST00000411361 118 ntBASIC2□□□□□ -2.09
LDB2O43679 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2□□□□□ -2.09
LDB2O43679 AC010154.1-201ENST00000425857 269 ntBASIC2□□□□□ -2.09
LDB2O43679 HMGN2P34-201ENST00000437647 269 ntBASIC2□□□□□ -2.09
LDB2O43679 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2□□□□□ -2.09
LDB2O43679 HSPE1P13-201ENST00000451143 297 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.650-201ENST00000459002 102 ntBASIC2□□□□□ -2.09
LDB2O43679 RNU4-71P-201ENST00000516258 113 ntBASIC2□□□□□ -2.09
LDB2O43679 RNU7-193P-201ENST00000516723 65 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.777-201ENST00000516982 102 ntBASIC2□□□□□ -2.09
LDB2O43679 AL137100.2-201ENST00000555786 315 ntBASIC2□□□□□ -2.09
LDB2O43679 MIR4643-201ENST00000577473 78 ntBASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.771-201ENST00000598668 102 ntBASIC2□□□□□ -2.09
LDB2O43679 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2□□□□□ -2.09
LDB2O43679 Y_RNA.789-201ENST00000622480 102 ntBASIC2□□□□□ -2.09
LDB2O43679 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
LDB2O43679 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.99□□□□□ -2.09
LDB2O43679 RNU6-1272P-201ENST00000362776 107 ntBASIC1.99□□□□□ -2.09
LDB2O43679 Y_RNA.65-201ENST00000362846 100 ntBASIC1.99□□□□□ -2.09
LDB2O43679 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
LDB2O43679 RNU6-23P-201ENST00000363283 107 ntBASIC1.99□□□□□ -2.09
LDB2O43679 Y_RNA.117-201ENST00000363294 101 ntBASIC1.99□□□□□ -2.09
LDB2O43679 RNA5SP493-201ENST00000364115 91 ntBASIC1.99□□□□□ -2.09
LDB2O43679 RNY1-201ENST00000364228 113 ntBASIC1.99□□□□□ -2.09
LDB2O43679 Y_RNA.456-201ENST00000384232 111 ntBASIC1.99□□□□□ -2.09
LDB2O43679 Y_RNA.515-201ENST00000384535 112 ntBASIC1.99□□□□□ -2.09
LDB2O43679 Y_RNA.590-201ENST00000410140 107 ntBASIC1.99□□□□□ -2.09
LDB2O43679 AL591806.2-201ENST00000433122 173 ntBASIC1.99□□□□□ -2.09
LDB2O43679 ATP5J2P3-201ENST00000451550 258 ntBASIC1.99□□□□□ -2.09
LDB2O43679 RPS27P22-201ENST00000478056 241 ntBASIC1.99□□□□□ -2.09
LDB2O43679 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.99□□□□□ -2.09
LDB2O43679 RNU6-1337P-201ENST00000516525 95 ntBASIC1.99□□□□□ -2.09
LDB2O43679 AC136628.3-201ENST00000521868 290 ntBASIC1.99□□□□□ -2.09
LDB2O43679 MIR3169-201ENST00000578032 83 ntBASIC1.99□□□□□ -2.09
LDB2O43679 MIR4282-201ENST00000583613 67 ntBASIC1.99□□□□□ -2.09
LDB2O43679 AL078604.3-201ENST00000615580 211 ntBASIC1.99□□□□□ -2.09
LDB2O43679 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LDB2O43679 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
LDB2O43679 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
LDB2O43679 RNU1-58P-201ENST00000362413 163 ntBASIC1.98□□□□□ -2.09
LDB2O43679 Y_RNA.269-201ENST00000364685 89 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms