Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SNORD14A-201ENST00000606526 91 ntBASIC2.44□□□□□ -2.02
PROM1O43490 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.44□□□□□ -2.02
PROM1O43490 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.44□□□□□ -2.02
PROM1O43490 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PROM1O43490 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PROM1O43490 AC080100.1-201ENST00000624239 5356 ntBASIC2.44□□□□□ -2.02
PROM1O43490 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PROM1O43490 RNU6-187P-201ENST00000384139 106 ntBASIC2.43□□□□□ -2.02
PROM1O43490 RNU6-804P-201ENST00000384286 107 ntBASIC2.43□□□□□ -2.02
PROM1O43490 AL137159.1-201ENST00000452808 512 ntBASIC2.43□□□□□ -2.02
PROM1O43490 RPS26P55-201ENST00000471178 356 ntBASIC2.43□□□□□ -2.02
PROM1O43490 AC117454.1-201ENST00000491120 168 ntBASIC2.43□□□□□ -2.02
PROM1O43490 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.43□□□□□ -2.02
PROM1O43490 RNA5SP20-201ENST00000515976 84 ntBASIC2.43□□□□□ -2.02
PROM1O43490 RNU6-1212P-201ENST00000517023 104 ntBASIC2.43□□□□□ -2.02
PROM1O43490 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
PROM1O43490 AC025647.1-201ENST00000517879 253 ntBASIC2.43□□□□□ -2.02
PROM1O43490 Y_RNA.802-201ENST00000614892 130 ntBASIC2.43□□□□□ -2.02
PROM1O43490 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
PROM1O43490 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PROM1O43490 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PROM1O43490 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.42□□□□□ -2.02
PROM1O43490 AL356292.1-201ENST00000283110 373 ntBASIC2.42□□□□□ -2.02
PROM1O43490 Y_RNA.24-201ENST00000362508 103 ntBASIC2.42□□□□□ -2.02
PROM1O43490 RNU6-1240P-201ENST00000365155 104 ntBASIC2.42□□□□□ -2.02
PROM1O43490 SNORD116-13-201ENST00000384408 92 ntBASIC2.42□□□□□ -2.02
PROM1O43490 Y_RNA.506-201ENST00000384494 102 ntBASIC2.42□□□□□ -2.02
PROM1O43490 MIR95-201ENST00000385072 81 ntBASIC2.42□□□□□ -2.02
PROM1O43490 AC010531.2-201ENST00000465012 153 ntBASIC2.42□□□□□ -2.02
PROM1O43490 RPS27P22-201ENST00000478056 241 ntBASIC2.42□□□□□ -2.02
PROM1O43490 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.42□□□□□ -2.02
PROM1O43490 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
PROM1O43490 Y_RNA.797-201ENST00000515977 94 ntBASIC2.42□□□□□ -2.02
PROM1O43490 Y_RNA.703-201ENST00000516846 111 ntBASIC2.42□□□□□ -2.02
PROM1O43490 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.42□□□□□ -2.02
PROM1O43490 AC004832.4-201ENST00000608952 331 ntBASIC2.42□□□□□ -2.02
PROM1O43490 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
PROM1O43490 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PROM1O43490 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PROM1O43490 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
PROM1O43490 SNORD114-7-201ENST00000362520 77 ntBASIC2.41□□□□□ -2.02
PROM1O43490 Y_RNA.170-201ENST00000363746 110 ntBASIC2.41□□□□□ -2.02
PROM1O43490 RNA5SP68-201ENST00000363885 119 ntBASIC2.41□□□□□ -2.02
PROM1O43490 U8.7-201ENST00000364940 136 ntBASIC2.41□□□□□ -2.02
PROM1O43490 Y_RNA.572-201ENST00000384757 98 ntBASIC2.41□□□□□ -2.02
PROM1O43490 MIR504-201ENST00000385065 83 ntBASIC2.41□□□□□ -2.02
PROM1O43490 MIR561-201ENST00000385216 97 ntBASIC2.41□□□□□ -2.02
PROM1O43490 AL355497.1-201ENST00000406262 551 ntBASIC2.41□□□□□ -2.02
PROM1O43490 snoU13.26-201ENST00000459452 105 ntBASIC2.41□□□□□ -2.02
PROM1O43490 RNA5SP24-201ENST00000516478 95 ntBASIC2.41□□□□□ -2.02
PROM1O43490 RNU2-34P-201ENST00000516534 121 ntBASIC2.41□□□□□ -2.02
PROM1O43490 RNU6-63P-201ENST00000516690 95 ntBASIC2.41□□□□□ -2.02
PROM1O43490 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.41□□□□□ -2.02
PROM1O43490 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.41□□□□□ -2.02
PROM1O43490 SNORD53-201ENST00000579969 78 ntBASIC2.41□□□□□ -2.02
PROM1O43490 MIR4524B-201ENST00000581569 115 ntBASIC2.41□□□□□ -2.02
PROM1O43490 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.41□□□□□ -2.02
PROM1O43490 MIR548AY-201ENST00000617669 107 ntBASIC2.41□□□□□ -2.02
PROM1O43490 AC064859.1-201ENST00000624741 174 ntBASIC2.41□□□□□ -2.02
PROM1O43490 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
PROM1O43490 AC068700.1-201ENST00000565862 3754 ntBASIC2.41□□□□□ -2.02
PROM1O43490 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
PROM1O43490 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PROM1O43490 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
PROM1O43490 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PROM1O43490 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
PROM1O43490 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.4□□□□□ -2.02
PROM1O43490 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PROM1O43490 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
PROM1O43490 MIR367-201ENST00000362299 68 ntBASIC2.4□□□□□ -2.03
PROM1O43490 SNORA3A-201ENST00000364113 130 ntBASIC2.4□□□□□ -2.03
PROM1O43490 RNU6-969P-201ENST00000383900 105 ntBASIC2.4□□□□□ -2.03
PROM1O43490 Y_RNA.412-201ENST00000384001 104 ntBASIC2.4□□□□□ -2.03
PROM1O43490 RNU1-148P-201ENST00000384472 162 ntBASIC2.4□□□□□ -2.03
PROM1O43490 RNU6-125P-201ENST00000384505 107 ntBASIC2.4□□□□□ -2.03
PROM1O43490 RNU6-381P-201ENST00000391259 108 ntBASIC2.4□□□□□ -2.03
PROM1O43490 MIR1253-201ENST00000408273 105 ntBASIC2.4□□□□□ -2.03
PROM1O43490 AC123900.1-201ENST00000420390 96 ntBASIC2.4□□□□□ -2.03
PROM1O43490 HSPE1P13-201ENST00000451143 297 ntBASIC2.4□□□□□ -2.03
PROM1O43490 AC093259.1-201ENST00000509755 300 ntBASIC2.4□□□□□ -2.03
PROM1O43490 SNORA4.4-201ENST00000515921 135 ntBASIC2.4□□□□□ -2.03
PROM1O43490 RN7SKP164-201ENST00000516138 266 ntBASIC2.4□□□□□ -2.03
PROM1O43490 RNU6-667P-201ENST00000517186 102 ntBASIC2.4□□□□□ -2.03
PROM1O43490 MIR3144-201ENST00000579460 79 ntBASIC2.4□□□□□ -2.03
PROM1O43490 MIR4769-201ENST00000584126 77 ntBASIC2.4□□□□□ -2.03
PROM1O43490 MIR6817-201ENST00000615588 66 ntBASIC2.4□□□□□ -2.03
PROM1O43490 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PROM1O43490 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
PROM1O43490 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PROM1O43490 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PROM1O43490 AC009487.4-201ENST00000624969 3585 ntBASIC2.4□□□□□ -2.03
PROM1O43490 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PROM1O43490 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PROM1O43490 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
PROM1O43490 AL159152.1-201ENST00000635019 2587 ntBASIC2.39□□□□□ -2.03
PROM1O43490 Y_RNA.121-201ENST00000363309 113 ntBASIC2.39□□□□□ -2.03
PROM1O43490 RNU4-13P-201ENST00000364019 141 ntBASIC2.39□□□□□ -2.03
PROM1O43490 snoU2_19.4-201ENST00000364329 80 ntBASIC2.39□□□□□ -2.03
PROM1O43490 Y_RNA.357-201ENST00000365487 109 ntBASIC2.39□□□□□ -2.03
PROM1O43490 MIR626-201ENST00000385032 94 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms