Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 ZNF702P-202ENST00000434269 1966 ntBASIC2.43□□□□□ -2.02
HOXA3O43365 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXA3O43365 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXA3O43365 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
HOXA3O43365 RNU6-199P-201ENST00000362954 107 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 Y_RNA.291-201ENST00000364886 113 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 Y_RNA.521-201ENST00000384560 114 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 SNORD37.2-201ENST00000391075 66 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 AL031121.1-201ENST00000406553 254 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 EDDM3CP-201ENST00000415977 425 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 AC104389.3-201ENST00000445629 235 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 SCGB1D5P-201ENST00000515134 247 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 RNA5SP217-201ENST00000515959 91 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXA3O43365 AC007229.1-201ENST00000590455 412 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 AL359075.3-201ENST00000613288 217 ntBASIC2.42□□□□□ -2.02
HOXA3O43365 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXA3O43365 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXA3O43365 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXA3O43365 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HOXA3O43365 RNU6-1209P-201ENST00000363655 107 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 MIR520G-201ENST00000385064 90 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 Y_RNA.586-201ENST00000391146 98 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 MIR513C-201ENST00000401352 84 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 SNORA79-201ENST00000408376 140 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 RNU2-55P-201ENST00000411146 174 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXA3O43365 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXA3O43365 AL139132.1-201ENST00000431587 344 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 RPS15AP28-201ENST00000435088 386 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 RPS27P1-201ENST00000450552 247 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 AC023449.1-201ENST00000454464 154 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 SNORA25.12-201ENST00000516202 82 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 RNU7-128P-201ENST00000517247 62 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXA3O43365 GTF3AP2-201ENST00000557014 266 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 AL353149.1-201ENST00000610667 244 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 uc_338.4-201ENST00000616635 176 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 MIR6844-201ENST00000637122 62 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXA3O43365 AC100821.1-201ENST00000523153 2479 ntBASIC2.41□□□□□ -2.02
HOXA3O43365 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXA3O43365 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.4□□□□□ -2.02
HOXA3O43365 Y_RNA.796-201ENST00000364268 102 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 Y_RNA.799-201ENST00000364992 102 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 RNU6-160P-201ENST00000384591 107 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 RNU6-768P-201ENST00000384683 107 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 SNORA26.7-201ENST00000391288 122 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 RNU6-257P-201ENST00000410238 98 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 Y_RNA.621-201ENST00000411065 96 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 RPL30P13-201ENST00000418873 348 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXA3O43365 RNA5SP367-201ENST00000516557 118 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 RNU1-142P-201ENST00000516682 145 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 AC112693.2-201ENST00000556538 232 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXA3O43365 RPL12P50-201ENST00000603116 116 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 U6.108-201ENST00000637764 58 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HOXA3O43365 AC010332.2-201ENST00000613083 1904 ntBASIC2.4□□□□□ -2.03
HOXA3O43365 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXA3O43365 AL035425.3-201ENST00000564206 4996 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 AC093831.2-201ENST00000624393 3427 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 RNU6-1117P-201ENST00000384525 104 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 RNU6-959P-201ENST00000384671 107 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 MIR887-201ENST00000401258 79 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 AL117342.1-201ENST00000404861 406 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 RN7SKP284-201ENST00000411002 343 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXA3O43365 AL135938.1-201ENST00000443141 297 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 UBBP3-201ENST00000445497 241 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 ATP5J2P3-201ENST00000451550 258 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 AC233266.1-201ENST00000454518 96 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 RN7SL636P-201ENST00000497504 294 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 RNA5SP356-201ENST00000515972 94 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 RNU6-1299P-201ENST00000516316 100 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 AC007536.1-201ENST00000533382 349 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 CYCSP26-201ENST00000534107 320 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.39□□□□□ -2.03
HOXA3O43365 MIR3646-201ENST00000578301 84 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 MIR548AI-201ENST00000579940 88 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 MIR378D2-201ENST00000580636 98 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 AC091178.2-201ENST00000584401 117 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 ELOCP29-201ENST00000588193 334 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 AC004832.5-201ENST00000608677 401 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 AC242852.1-201ENST00000612151 96 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 AC244015.1-201ENST00000622301 99 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HOXA3O43365 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXA3O43365 FAM35CP-201ENST00000554755 2470 ntBASIC2.39□□□□□ -2.03
HOXA3O43365 AC245060.5-201ENST00000610778 3293 ntBASIC2.38□□□□□ -2.03
HOXA3O43365 RNA5SP493-201ENST00000364115 91 ntBASIC2.38□□□□□ -2.03
HOXA3O43365 Y_RNA.393-201ENST00000383936 102 ntBASIC2.38□□□□□ -2.03
HOXA3O43365 RNU6-1080P-201ENST00000383982 107 ntBASIC2.38□□□□□ -2.03
HOXA3O43365 RNU6-484P-201ENST00000384016 107 ntBASIC2.38□□□□□ -2.03
HOXA3O43365 Y_RNA.432-201ENST00000384087 111 ntBASIC2.38□□□□□ -2.03
HOXA3O43365 SNORA20-201ENST00000384662 132 ntBASIC2.38□□□□□ -2.03
HOXA3O43365 RNU11-5P-201ENST00000391216 129 ntBASIC2.38□□□□□ -2.03
HOXA3O43365 SNORD11-201ENST00000459124 84 ntBASIC2.38□□□□□ -2.03
HOXA3O43365 YWHAEP4-201ENST00000505390 198 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 254.7 ms