Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 Y_RNA.124-201ENST00000363339 93 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 MIR653-201ENST00000385279 96 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 RNA5SP475-201ENST00000410568 110 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 MTND1P34-201ENST00000438556 671 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 AL137792.2-201ENST00000443484 235 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.97□□□□□ -2.25
CLDN5O00501 AC069439.1-201ENST00000494739 167 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 Y_RNA.655-201ENST00000515919 96 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 SNORD116-28-201ENST00000516123 91 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 SCARNA16.2-201ENST00000516520 172 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 RN7SKP49-201ENST00000516675 260 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.97□□□□□ -2.25
CLDN5O00501 FAM106DP-201ENST00000586416 501 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 AC127459.3-201ENST00000624328 466 ntBASIC0.97□□□□□ -2.25
CLDN5O00501 RNU1-124P-201ENST00000363861 145 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 Y_RNA.404-201ENST00000383978 102 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 RNU6-318P-201ENST00000384283 103 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 RNA5SP482-201ENST00000391269 118 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 MIR873-201ENST00000401120 77 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.96□□□□□ -2.26
CLDN5O00501 AC104332.1-201ENST00000440471 797 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.96□□□□□ -2.26
CLDN5O00501 RPS29P1-201ENST00000465274 159 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
CLDN5O00501 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.96□□□□□ -2.26
CLDN5O00501 AC011712.1-201ENST00000588959 234 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.96□□□□□ -2.26
CLDN5O00501 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 AC092794.2-201ENST00000620933 563 ntBASIC0.96□□□□□ -2.26
CLDN5O00501 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CLDN5O00501 Y_RNA.88-201ENST00000363029 99 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 RNU6-454P-201ENST00000364292 107 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 Y_RNA.339-201ENST00000365325 102 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 Y_RNA.482-201ENST00000384377 111 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 AC245047.7-201ENST00000440265 293 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 RPL39P39-201ENST00000455840 151 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 AL049830.1-201ENST00000468034 425 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 AC022493.2-201ENST00000506122 481 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 RNU6-63P-201ENST00000516690 95 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 RNU6-1096P-201ENST00000517089 102 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
CLDN5O00501 AC005899.2-201ENST00000584353 90 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 AC060780.3-201ENST00000589464 80 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 AL117336.2-201ENST00000602435 335 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 AC084782.3-201ENST00000612282 578 ntBASIC0.95□□□□□ -2.26
CLDN5O00501 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.95□□□□□ -2.26
CLDN5O00501 MIR410-201ENST00000362222 80 ntBASIC0.94□□□□□ -2.26
CLDN5O00501 SNORA2.2-201ENST00000365473 135 ntBASIC0.94□□□□□ -2.26
CLDN5O00501 MIR520G-201ENST00000385064 90 ntBASIC0.94□□□□□ -2.26
CLDN5O00501 SNORA75.4-201ENST00000391278 119 ntBASIC0.94□□□□□ -2.26
CLDN5O00501 SNORD12B-201ENST00000410433 91 ntBASIC0.94□□□□□ -2.26
CLDN5O00501 RNU6-1054P-201ENST00000411293 104 ntBASIC0.94□□□□□ -2.26
CLDN5O00501 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.94□□□□□ -2.26
CLDN5O00501 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
CLDN5O00501 RNU6-307P-201ENST00000516743 106 ntBASIC0.94□□□□□ -2.26
CLDN5O00501 AL357312.1-201ENST00000603879 298 ntBASIC0.94□□□□□ -2.26
CLDN5O00501 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.94□□□□□ -2.26
CLDN5O00501 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.94□□□□□ -2.26
CLDN5O00501 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CLDN5O00501 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.93□□□□□ -2.26
CLDN5O00501 AC114482.1-201ENST00000418010 247 ntBASIC0.93□□□□□ -2.26
CLDN5O00501 AC063976.4-201ENST00000421971 163 ntBASIC0.93□□□□□ -2.26
CLDN5O00501 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.93□□□□□ -2.26
CLDN5O00501 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.93□□□□□ -2.26
CLDN5O00501 MIR2053-201ENST00000459295 91 ntBASIC0.93□□□□□ -2.26
CLDN5O00501 RPL17P19-201ENST00000489069 552 ntBASIC0.93□□□□□ -2.26
CLDN5O00501 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.93□□□□□ -2.26
CLDN5O00501 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.93□□□□□ -2.26
CLDN5O00501 RNU6-1213P-201ENST00000517075 94 ntBASIC0.93□□□□□ -2.26
CLDN5O00501 RNU6-1116P-201ENST00000517269 99 ntBASIC0.93□□□□□ -2.26
CLDN5O00501 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
CLDN5O00501 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.93□□□□□ -2.26
CLDN5O00501 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
CLDN5O00501 MIRLET7C-201ENST00000362160 84 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 Y_RNA.72-201ENST00000362894 103 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 RNU4-41P-201ENST00000364426 143 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 RNU6-99P-201ENST00000364721 107 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 RNU6-117P-201ENST00000365415 107 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 RNU5A-5P-201ENST00000411054 116 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 Y_RNA.621-201ENST00000411065 96 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.92□□□□□ -2.26
CLDN5O00501 SUMO1P2-201ENST00000452524 304 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.92□□□□□ -2.26
CLDN5O00501 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 RNU7-30P-201ENST00000516835 62 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.92□□□□□ -2.26
CLDN5O00501 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.92□□□□□ -2.26
CLDN5O00501 AC005828.6-201ENST00000606610 232 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 AC012676.2-201ENST00000619258 186 ntBASIC0.92□□□□□ -2.26
CLDN5O00501 Y_RNA.363-201ENST00000365529 113 ntBASIC0.91□□□□□ -2.26
CLDN5O00501 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.91□□□□□ -2.26
CLDN5O00501 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.91□□□□□ -2.26
CLDN5O00501 SNORD79.1-201ENST00000516069 84 ntBASIC0.91□□□□□ -2.26
CLDN5O00501 RNU6-358P-201ENST00000516564 75 ntBASIC0.91□□□□□ -2.26
CLDN5O00501 AC023442.1-201ENST00000531247 422 ntBASIC0.91□□□□□ -2.26
CLDN5O00501 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.91□□□□□ -2.26
CLDN5O00501 HSPE1P19-201ENST00000603327 295 ntBASIC0.91□□□□□ -2.26
CLDN5O00501 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms