Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 POLR3GP1-201ENST00000594073 261 ntBASIC2.64□□□□□ -1.99
CBX4O00257 AP003357.1-201ENST00000604497 148 ntBASIC2.64□□□□□ -1.99
CBX4O00257 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.64□□□□□ -1.99
CBX4O00257 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.64□□□□□ -1.99
CBX4O00257 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
CBX4O00257 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CBX4O00257 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CBX4O00257 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CBX4O00257 RNU6-653P-201ENST00000363074 106 ntBASIC2.63□□□□□ -1.99
CBX4O00257 RNU1-96P-201ENST00000364163 162 ntBASIC2.63□□□□□ -1.99
CBX4O00257 RNU6-923P-201ENST00000364753 107 ntBASIC2.63□□□□□ -1.99
CBX4O00257 RNU6-136P-201ENST00000384663 107 ntBASIC2.63□□□□□ -1.99
CBX4O00257 SNORA8.3-201ENST00000384679 139 ntBASIC2.63□□□□□ -1.99
CBX4O00257 SNORA67.4-201ENST00000384688 142 ntBASIC2.63□□□□□ -1.99
CBX4O00257 AC009310.1-201ENST00000414414 451 ntBASIC2.63□□□□□ -1.99
CBX4O00257 EBAG9P1-201ENST00000418955 543 ntBASIC2.63□□□□□ -1.99
CBX4O00257 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.63□□□□□ -1.99
CBX4O00257 CST2P1-201ENST00000425770 87 ntBASIC2.63□□□□□ -1.99
CBX4O00257 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.63□□□□□ -1.99
CBX4O00257 HMGB3P3-201ENST00000510526 400 ntBASIC2.63□□□□□ -1.99
CBX4O00257 RNU7-99P-201ENST00000516271 62 ntBASIC2.63□□□□□ -1.99
CBX4O00257 RNU1-142P-201ENST00000516682 145 ntBASIC2.63□□□□□ -1.99
CBX4O00257 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.63□□□□□ -1.99
CBX4O00257 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.63□□□□□ -1.99
CBX4O00257 SNORD53-201ENST00000579969 78 ntBASIC2.63□□□□□ -1.99
CBX4O00257 Y_RNA.802-201ENST00000614892 130 ntBASIC2.63□□□□□ -1.99
CBX4O00257 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CBX4O00257 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CBX4O00257 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CBX4O00257 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CBX4O00257 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CBX4O00257 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.62□□□□□ -1.99
CBX4O00257 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.62□□□□□ -1.99
CBX4O00257 SNORD114-30-201ENST00000364448 72 ntBASIC2.62□□□□□ -1.99
CBX4O00257 RNU4-17P-201ENST00000365598 141 ntBASIC2.62□□□□□ -1.99
CBX4O00257 RNA5SP467-201ENST00000391274 118 ntBASIC2.62□□□□□ -1.99
CBX4O00257 RNU6-493P-201ENST00000391321 108 ntBASIC2.62□□□□□ -1.99
CBX4O00257 SNORA11.4-201ENST00000408823 129 ntBASIC2.62□□□□□ -1.99
CBX4O00257 SNORA36B-201ENST00000410438 131 ntBASIC2.62□□□□□ -1.99
CBX4O00257 RPL23AP54-201ENST00000495129 419 ntBASIC2.62□□□□□ -1.99
CBX4O00257 RNY3P16-201ENST00000516338 101 ntBASIC2.62□□□□□ -1.99
CBX4O00257 RNU6-826P-201ENST00000516827 104 ntBASIC2.62□□□□□ -1.99
CBX4O00257 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.62□□□□□ -1.99
CBX4O00257 AC100767.1-201ENST00000528178 123 ntBASIC2.62□□□□□ -1.99
CBX4O00257 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CBX4O00257 AC127455.1-201ENST00000565496 145 ntBASIC2.62□□□□□ -1.99
CBX4O00257 AC005786.1-201ENST00000588553 154 ntBASIC2.62□□□□□ -1.99
CBX4O00257 AC072026.1-201ENST00000605023 201 ntBASIC2.62□□□□□ -1.99
CBX4O00257 AC064859.1-201ENST00000624741 174 ntBASIC2.62□□□□□ -1.99
CBX4O00257 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CBX4O00257 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.62□□□□□ -1.99
CBX4O00257 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.62□□□□□ -1.99
CBX4O00257 MIR367-201ENST00000362299 68 ntBASIC2.61□□□□□ -1.99
CBX4O00257 RNA5SP289-201ENST00000362332 137 ntBASIC2.61□□□□□ -1.99
CBX4O00257 RNU6-862P-201ENST00000362804 105 ntBASIC2.61□□□□□ -1.99
CBX4O00257 Y_RNA.270-201ENST00000364693 104 ntBASIC2.61□□□□□ -1.99
CBX4O00257 RNA5SP270-201ENST00000411361 118 ntBASIC2.61□□□□□ -1.99
CBX4O00257 RN7SL297P-201ENST00000483161 293 ntBASIC2.61□□□□□ -1.99
CBX4O00257 RNA5SP24-201ENST00000516478 95 ntBASIC2.61□□□□□ -1.99
CBX4O00257 AC024995.1-201ENST00000523014 93 ntBASIC2.61□□□□□ -1.99
CBX4O00257 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.61□□□□□ -1.99
CBX4O00257 AC073413.2-201ENST00000604332 360 ntBASIC2.61□□□□□ -1.99
CBX4O00257 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CBX4O00257 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CBX4O00257 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CBX4O00257 VTRNA1-1-201ENST00000363120 99 ntBASIC2.6□□□□□ -1.99
CBX4O00257 SNORA8-201ENST00000384574 139 ntBASIC2.6□□□□□ -1.99
CBX4O00257 MIR520G-201ENST00000385064 90 ntBASIC2.6□□□□□ -1.99
CBX4O00257 AL117342.1-201ENST00000404861 406 ntBASIC2.6□□□□□ -1.99
CBX4O00257 SNORA3.2-201ENST00000408221 125 ntBASIC2.6□□□□□ -1.99
CBX4O00257 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.6□□□□□ -1.99
CBX4O00257 BX510359.4-201ENST00000423750 193 ntBASIC2.6□□□□□ -1.99
CBX4O00257 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.6□□□□□ -1.99
CBX4O00257 RNU7-120P-201ENST00000459334 63 ntBASIC2.6□□□□□ -1.99
CBX4O00257 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.6□□□□□ -1.99
CBX4O00257 MIR4724-201ENST00000579485 89 ntBASIC2.6□□□□□ -1.99
CBX4O00257 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.6□□□□□ -1.99
CBX4O00257 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.6□□□□□ -1.99
CBX4O00257 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.6□□□□□ -1.99
CBX4O00257 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CBX4O00257 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
CBX4O00257 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CBX4O00257 U8.2-201ENST00000363156 134 ntBASIC2.59□□□□□ -1.99
CBX4O00257 RNU6-47P-201ENST00000383866 107 ntBASIC2.59□□□□□ -1.99
CBX4O00257 SNORA72-201ENST00000384339 132 ntBASIC2.59□□□□□ -1.99
CBX4O00257 MIR526A2-201ENST00000390198 65 ntBASIC2.59□□□□□ -1.99
CBX4O00257 RNU11-3P-201ENST00000391111 133 ntBASIC2.59□□□□□ -1.99
CBX4O00257 COX6CP10-201ENST00000416832 224 ntBASIC2.59□□□□□ -1.99
CBX4O00257 RNA5SP320-201ENST00000516263 124 ntBASIC2.59□□□□□ -1.99
CBX4O00257 MIR5688-201ENST00000580619 83 ntBASIC2.59□□□□□ -1.99
CBX4O00257 FTX_2.1-201ENST00000618816 94 ntBASIC2.59□□□□□ -1.99
CBX4O00257 MIR7843-201ENST00000622274 79 ntBASIC2.59□□□□□ -1.99
CBX4O00257 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.59□□□□□ -1.99
CBX4O00257 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.59□□□□□ -1.99
CBX4O00257 RNU6-209P-201ENST00000384118 107 ntBASIC2.58□□□□□ -2
CBX4O00257 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
CBX4O00257 RNA5SP465-201ENST00000391195 109 ntBASIC2.58□□□□□ -2
CBX4O00257 RNU6-918P-201ENST00000391219 106 ntBASIC2.58□□□□□ -2
CBX4O00257 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.58□□□□□ -2
CBX4O00257 RNU7-94P-201ENST00000459576 63 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms