Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 SNORD116-15-201ENST00000384445 92 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 SNORA20-201ENST00000384662 132 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 SNORD116-19-201ENST00000384729 92 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 AC092427.1-202ENST00000430569 476 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 AC245047.4-201ENST00000433189 144 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 AC009238.1-201ENST00000442165 424 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 Z96811.1-201ENST00000445880 108 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 RPS4XP11-201ENST00000446897 772 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 AC009237.6-201ENST00000446969 424 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 RNU6-1299P-201ENST00000516316 100 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 AL929325.1-201ENST00000603096 117 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 uc_338.4-201ENST00000616635 176 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 AP006437.1-201ENST00000641440 3685 ntBASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UPK3BL1B0FP48 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 AC073325.2-201ENST00000339545 159 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 MIR340-201ENST00000362125 95 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.218-201ENST00000364218 104 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 RNU6-80P-201ENST00000384195 107 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 RNU6-136P-201ENST00000384663 107 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 RNU6-588P-201ENST00000410281 105 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 AC060773.1-201ENST00000421698 310 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 RNU6-126P-201ENST00000516685 103 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 MIR4435-1-201ENST00000582552 80 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 AL136360.1-201ENST00000503377 1900 ntBASIC3.05□□□□□ -1.92
UPK3BL1B0FP48 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 MIR148B-201ENST00000362252 99 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 RNU6-1180P-201ENST00000364935 107 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 SNORA25B-201ENST00000365507 128 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 DYNLT3P1-201ENST00000378574 347 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 RNU6-1080P-201ENST00000383982 107 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 MIR520G-201ENST00000385064 90 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 AC105272.1-201ENST00000438604 198 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 AL135938.1-201ENST00000443141 297 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 RNU6-1211P-201ENST00000459179 105 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 SNORD77.4-201ENST00000516158 81 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 AP001328.1-201ENST00000528550 176 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 AC011604.1-201ENST00000545978 196 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 MIR3186-201ENST00000577404 85 ntBASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
UPK3BL1B0FP48 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 RNU4-82P-201ENST00000362443 140 ntBASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.99-201ENST00000363138 105 ntBASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 Y_RNA.273-201ENST00000364703 102 ntBASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 RNU6-851P-201ENST00000384565 107 ntBASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 RN7SL20P-201ENST00000488827 297 ntBASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 RPL23AP91-201ENST00000569211 455 ntBASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 AL031274.2-201ENST00000599419 203 ntBASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 AL049861.1-201ENST00000603130 150 ntBASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 AC120024.3-201ENST00000603167 156 ntBASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
UPK3BL1B0FP48 MAPK10-266ENST00000641066 6555 ntBASIC3.03□□□□□ -1.93
UPK3BL1B0FP48 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 AC062016.1-201ENST00000355719 319 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 Y_RNA.796-201ENST00000364268 102 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 RNU6-978P-201ENST00000364371 103 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 SNORA25.7-201ENST00000364375 127 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 Y_RNA.799-201ENST00000364992 102 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 MIR592-201ENST00000384959 97 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 SNORA26-201ENST00000391286 122 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 SNORD11-201ENST00000459124 84 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 RNU4-57P-201ENST00000515980 135 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 RNU6-1333P-201ENST00000516162 93 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 RNU7-99P-201ENST00000516271 62 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 MIR4319-201ENST00000577285 85 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 AL359881.1-201ENST00000602916 267 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 AC097639.2-201ENST00000603159 172 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 U7.2-201ENST00000607576 63 ntBASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
UPK3BL1B0FP48 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 Y_RNA.81-201ENST00000362997 102 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 Y_RNA.261-201ENST00000364631 102 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 RNU6-460P-201ENST00000391158 108 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 EDDM3CP-201ENST00000415977 425 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 AC022018.1-201ENST00000430685 241 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 AL353689.1-201ENST00000438895 199 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 AC104389.3-201ENST00000445629 235 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 AC018868.1-201ENST00000491307 315 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 AC011406.1-201ENST00000512440 370 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 AC090142.3-201ENST00000519012 385 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 MIR4662B-201ENST00000579498 81 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 AC011603.4-201ENST00000611325 277 ntBASIC3.01□□□□□ -1.93
UPK3BL1B0FP48 MIR7153-201ENST00000637758 57 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms