Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 PART1_1.1-201ENST00000611761 217 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 MIR8054-201ENST00000620877 86 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 AC127459.3-201ENST00000624328 466 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 MIR6079-201ENST00000635807 62 ntBASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
NKX6-3A6NJ46 AC018630.2-201ENST00000534866 2403 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.28-201ENST00000362554 111 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 RNA5SP363-201ENST00000365072 115 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 SNORA22B-201ENST00000383876 138 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.439-201ENST00000384119 94 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 MRPL42P3-201ENST00000401492 326 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 MIR1302-11-201ENST00000408051 138 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 MIR1302-9-201ENST00000408365 138 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 MIR1302-10-201ENST00000408734 138 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 RNU6-1199P-201ENST00000411249 104 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 JTBP1-201ENST00000441314 247 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 STAG3L5P-204ENST00000443759 179 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 HSPE1P24-201ENST00000450782 238 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 AC233266.1-201ENST00000454518 96 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 snoU13.9-201ENST00000458927 103 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 RNU6-250P-201ENST00000516958 103 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 SNORA44.1-201ENST00000517031 108 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 RNU6-988P-201ENST00000519081 107 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 MIR3684-201ENST00000579779 74 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 AL121655.1-201ENST00000605811 308 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 AC005828.6-201ENST00000606610 232 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 MIR1302-2-201ENST00000607096 138 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 AC242852.1-201ENST00000612151 96 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 AL353997.5-201ENST00000618886 171 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 AC244015.1-201ENST00000622301 99 ntBASIC1.42□□□□□ -2.18
NKX6-3A6NJ46 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.128-201ENST00000363391 112 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 RNA5SP99-201ENST00000364020 114 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 RNU4-50P-201ENST00000364361 141 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.331-201ENST00000365267 102 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.389-201ENST00000383924 113 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.645-201ENST00000391229 102 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 AL627390.1-201ENST00000396055 340 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 MIR548P-201ENST00000408336 84 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 RNU6-130P-201ENST00000411112 103 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 U8.20-201ENST00000459445 131 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 RNU6-1278P-201ENST00000516130 107 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 RNU6-1337P-201ENST00000516525 95 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 RNU6-1046P-201ENST00000516538 107 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 MIR3171-201ENST00000584270 74 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 AC104695.3-201ENST00000604052 296 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 ICE2P2-201ENST00000483823 2787 ntBASIC1.41□□□□□ -2.18
NKX6-3A6NJ46 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.18
NKX6-3A6NJ46 Y_RNA.172-201ENST00000363765 102 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.329-201ENST00000365209 107 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.526-201ENST00000384572 110 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.570-201ENST00000384750 101 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 RNA5SP511-201ENST00000410487 115 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.621-201ENST00000411065 96 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AL163540.1-201ENST00000485382 386 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 RNU6-436P-201ENST00000516171 114 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 SNORA77B-201ENST00000578179 125 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AC022441.3-201ENST00000605737 136 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AC011373.1-201ENST00000607270 237 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 MIR8081-201ENST00000611533 95 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AC021506.2-201ENST00000612354 169 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AC040896.1-201ENST00000613819 479 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AC010205.1-201ENST00000616668 449 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 AC134503.1-201ENST00000633048 54 ntBASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
NKX6-3A6NJ46 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 RNU1-17P-201ENST00000363022 152 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.230-201ENST00000364348 109 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.265-201ENST00000364677 108 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 SNORD116-13-201ENST00000384408 92 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 RNU6-1031P-201ENST00000384773 107 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 RN7SKP200-201ENST00000410564 320 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 AL354751.2-201ENST00000415471 210 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 RNU7-94P-201ENST00000459576 63 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.701-201ENST00000516812 110 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 RNU2-56P-201ENST00000516826 190 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 Y_RNA.711-201ENST00000516993 102 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 RNU6-1096P-201ENST00000517089 102 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 MIR3145-201ENST00000580727 82 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 AP000648.3-201ENST00000623539 4507 ntBASIC1.39□□□□□ -2.19
NKX6-3A6NJ46 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms