Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 MIR3124-201ENST00000582636 67 ntBASIC3.64□□□□□ -1.83
USP17L3A6NCW0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
USP17L3A6NCW0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
USP17L3A6NCW0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
USP17L3A6NCW0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.63□□□□□ -1.83
USP17L3A6NCW0 Y_RNA.120-201ENST00000363304 110 ntBASIC3.63□□□□□ -1.83
USP17L3A6NCW0 RNU6-851P-201ENST00000384565 107 ntBASIC3.63□□□□□ -1.83
USP17L3A6NCW0 SRIP3-201ENST00000413200 219 ntBASIC3.63□□□□□ -1.83
USP17L3A6NCW0 AL513477.1-202ENST00000417061 214 ntBASIC3.63□□□□□ -1.83
USP17L3A6NCW0 AL353689.1-201ENST00000438895 199 ntBASIC3.63□□□□□ -1.83
USP17L3A6NCW0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.63□□□□□ -1.83
USP17L3A6NCW0 AC131055.1-201ENST00000584626 316 ntBASIC3.63□□□□□ -1.83
USP17L3A6NCW0 AL359075.3-201ENST00000613288 217 ntBASIC3.63□□□□□ -1.83
USP17L3A6NCW0 Pinc.1-201ENST00000616452 154 ntBASIC3.63□□□□□ -1.83
USP17L3A6NCW0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
USP17L3A6NCW0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.63□□□□□ -1.83
USP17L3A6NCW0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP17L3A6NCW0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
USP17L3A6NCW0 AC073325.2-201ENST00000339545 159 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 RNU6-1056P-201ENST00000383996 107 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 Y_RNA.563-201ENST00000384707 108 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
USP17L3A6NCW0 RNA5SP184-201ENST00000411071 108 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 RPL39P40-201ENST00000445481 146 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 Y_RNA.692-201ENST00000516627 105 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 AC104027.1-201ENST00000521887 300 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 AC073476.4-201ENST00000628409 72 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 AL136360.1-201ENST00000503377 1900 ntBASIC3.62□□□□□ -1.83
USP17L3A6NCW0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP17L3A6NCW0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP17L3A6NCW0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP17L3A6NCW0 RNU6-461P-201ENST00000364195 107 ntBASIC3.61□□□□□ -1.83
USP17L3A6NCW0 AL035461.1-201ENST00000421490 332 ntBASIC3.61□□□□□ -1.83
USP17L3A6NCW0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.61□□□□□ -1.83
USP17L3A6NCW0 AC108938.1-201ENST00000451204 136 ntBASIC3.61□□□□□ -1.83
USP17L3A6NCW0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.61□□□□□ -1.83
USP17L3A6NCW0 AL353149.1-201ENST00000610667 244 ntBASIC3.61□□□□□ -1.83
USP17L3A6NCW0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
USP17L3A6NCW0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP17L3A6NCW0 AC062016.1-201ENST00000355719 319 ntBASIC3.6□□□□□ -1.83
USP17L3A6NCW0 Y_RNA.99-201ENST00000363138 105 ntBASIC3.6□□□□□ -1.83
USP17L3A6NCW0 RNU6-1325P-201ENST00000364905 105 ntBASIC3.6□□□□□ -1.83
USP17L3A6NCW0 RN7SKP284-201ENST00000411002 343 ntBASIC3.6□□□□□ -1.83
USP17L3A6NCW0 RNU7-107P-201ENST00000459121 61 ntBASIC3.6□□□□□ -1.83
USP17L3A6NCW0 AC018868.1-201ENST00000491307 315 ntBASIC3.6□□□□□ -1.83
USP17L3A6NCW0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.6□□□□□ -1.83
USP17L3A6NCW0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
USP17L3A6NCW0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP17L3A6NCW0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.6□□□□□ -1.83
USP17L3A6NCW0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP17L3A6NCW0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP17L3A6NCW0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.59□□□□□ -1.83
USP17L3A6NCW0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
USP17L3A6NCW0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
USP17L3A6NCW0 AC018630.2-201ENST00000534866 2403 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 U8.1-201ENST00000362843 134 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 SNORA25B-201ENST00000365507 128 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 SNORD18B-201ENST00000365659 72 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 Z98941.1-201ENST00000407764 100 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 HMGN1P7-201ENST00000491722 313 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 RNU6-1041P-201ENST00000516254 102 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 RNA5SP76-201ENST00000516277 87 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 Y_RNA.712-201ENST00000517011 92 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 RNU6-365P-201ENST00000517113 106 ntBASIC3.59□□□□□ -1.83
USP17L3A6NCW0 AC096644.4-201ENST00000563417 2912 ntBASIC3.59□□□□□ -1.84
USP17L3A6NCW0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.58□□□□□ -1.84
USP17L3A6NCW0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP17L3A6NCW0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
USP17L3A6NCW0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP17L3A6NCW0 EDDM3CP-201ENST00000415977 425 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 AC104332.2-201ENST00000429959 156 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 AL109933.2-201ENST00000452651 260 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 AC233266.1-201ENST00000454518 96 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 RNU7-128P-201ENST00000517247 62 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 AC107016.2-201ENST00000547968 190 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 AC091178.2-201ENST00000584401 117 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 AC242852.1-201ENST00000612151 96 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 AC007318.2-201ENST00000620999 243 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 AC244015.1-201ENST00000622301 99 ntBASIC3.58□□□□□ -1.84
USP17L3A6NCW0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP17L3A6NCW0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
USP17L3A6NCW0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.58□□□□□ -1.84
USP17L3A6NCW0 RNA5SP125-201ENST00000364843 120 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP17L3A6NCW0 AC018634.1-201ENST00000437554 401 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.57□□□□□ -1.84
USP17L3A6NCW0 RN7SL636P-201ENST00000497504 294 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 SNORA18.4-201ENST00000516440 124 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 RNU1-142P-201ENST00000516682 145 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 MIR5047-201ENST00000579212 100 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.57□□□□□ -1.84
USP17L3A6NCW0 AL449363.1-201ENST00000617815 186 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 MIR6079-201ENST00000635807 62 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 MIR338-201ENST00000636369 67 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 MAPK10-362ENST00000641864 4484 ntBASIC3.57□□□□□ -1.84
USP17L3A6NCW0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.56□□□□□ -1.84
USP17L3A6NCW0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
USP17L3A6NCW0 RNU6-235P-201ENST00000362644 107 ntBASIC3.56□□□□□ -1.84
USP17L3A6NCW0 SNORD56.3-201ENST00000363507 71 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms