Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6-493P-201ENST00000391321 108 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 Y_RNA.621-201ENST00000411065 96 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 Y_RNA.793-201ENST00000411222 111 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 AL135786.1-201ENST00000415892 214 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 HMGN2P3-201ENST00000433603 273 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 HMGN2P5-201ENST00000436882 273 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 AC104332.1-201ENST00000440471 797 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 AC233266.1-201ENST00000454518 96 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 RPL23AP54-201ENST00000495129 419 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 AC015720.1-201ENST00000565251 277 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 AC078899.2-201ENST00000595282 212 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 AC242852.1-201ENST00000612151 96 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 ZNF658B-202ENST00000615961 3375 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 MIR548AY-201ENST00000617669 107 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 AC244015.1-201ENST00000622301 99 ntBASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCDC163A0A0D9SF12 SNORA40.19-201ENST00000390846 128 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 SNORA11.4-201ENST00000408823 129 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 AL138752.1-201ENST00000452964 351 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 snoU13.15-201ENST00000459407 104 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 RN7SKP43-201ENST00000516173 320 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 RNU7-99P-201ENST00000516271 62 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 RNU7-115P-201ENST00000516433 55 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 AL078604.3-201ENST00000615580 211 ntBASIC2.71□□□□□ -1.98
CCDC163A0A0D9SF12 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 RNU1-35P-201ENST00000362782 153 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 U8.2-201ENST00000363156 134 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 RNU6-117P-201ENST00000365415 107 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 MIR518A2-201ENST00000384966 87 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 SNORA36B-201ENST00000410438 131 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 AL162725.1-201ENST00000435405 301 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 SNORA81.3-201ENST00000517283 198 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 MIR4529-201ENST00000578110 78 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 MIR5094-201ENST00000578766 85 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 MIR4524B-201ENST00000581569 115 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 ZNF861P-201ENST00000588126 639 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC163A0A0D9SF12 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 Y_RNA.267-201ENST00000364679 109 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 SNORA46-201ENST00000384762 135 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 HMGN2P39-201ENST00000398005 273 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 AL117342.1-201ENST00000404861 406 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 SNORA3.2-201ENST00000408221 125 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 AC099677.2-201ENST00000436385 175 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 Y_RNA.644-201ENST00000459006 113 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 AL163195.1-201ENST00000496941 348 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 Y_RNA.674-201ENST00000516362 113 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 AC245166.1-201ENST00000521012 253 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 AC011921.3-201ENST00000605540 361 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 AL353149.1-201ENST00000610667 244 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC163A0A0D9SF12 Y_RNA.29-201ENST00000362570 113 ntBASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 Y_RNA.304-201ENST00000365011 112 ntBASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 RNU6-1323P-201ENST00000384025 107 ntBASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 SNORA6-201ENST00000384033 151 ntBASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 CST2P1-201ENST00000425770 87 ntBASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 AC091021.1-201ENST00000468051 388 ntBASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 RNU7-116P-201ENST00000516940 62 ntBASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 RNU6-182P-201ENST00000516970 105 ntBASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 AC005786.1-201ENST00000588553 154 ntBASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC163A0A0D9SF12 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 Y_RNA.24-201ENST00000362508 103 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 RNU6-1020P-201ENST00000363684 107 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 MT-TR-201ENST00000387439 65 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 RNU6-383P-201ENST00000410864 94 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 COX6CP14-201ENST00000469580 174 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 RNU6-1291P-201ENST00000516591 104 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 RNU6-1096P-201ENST00000517089 102 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 AC021269.2-201ENST00000532318 330 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 Y_RNA.802-201ENST00000614892 130 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 AC068700.1-201ENST00000565862 3754 ntBASIC2.67□□□□□ -1.98
CCDC163A0A0D9SF12 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 MIR367-201ENST00000362299 68 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 RNU6-47P-201ENST00000383866 107 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 SNORA8.3-201ENST00000384679 139 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 RNA5SP425-201ENST00000410336 112 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 PIGPP3-201ENST00000425307 415 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 AC018634.1-201ENST00000437554 401 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 RPS4XP11-201ENST00000446897 772 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 RPL36AP21-201ENST00000490372 323 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 RNA5SP82-201ENST00000516707 92 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 SNORA31.25-201ENST00000517242 134 ntBASIC2.66□□□□□ -1.98
CCDC163A0A0D9SF12 AP002392.1-201ENST00000537692 208 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms