Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RNA5SP68-201ENST00000363885 119 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 Y_RNA.304-201ENST00000365011 112 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 MIR515-2-201ENST00000384883 83 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 MIR515-1-201ENST00000384884 83 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNA5SP465-201ENST00000391195 109 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 MTND5P15-201ENST00000434246 349 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 COX6CP14-201ENST00000469580 174 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 TRBV12-1-201ENST00000479785 344 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNA5SP282-201ENST00000516355 108 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNA5SP148-201ENST00000516527 94 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 MIR5094-201ENST00000578766 85 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 POLR3GP1-201ENST00000594073 261 ntBASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
IGHV4-28A0A0C4DH34 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNU6-1205P-201ENST00000363625 106 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNU4-10P-201ENST00000364383 140 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 Y_RNA.262-201ENST00000364641 102 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 Y_RNA.308-201ENST00000365043 101 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNU6-1323P-201ENST00000384025 107 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNA5SP210-201ENST00000391034 120 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 AL355497.1-201ENST00000406262 551 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 SNORA11.4-201ENST00000408823 129 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 SNORA36B-201ENST00000410438 131 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 AC018634.1-201ENST00000437554 401 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 RPS4XP11-201ENST00000446897 772 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 AC091021.1-201ENST00000468051 388 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 RPL23AP54-201ENST00000495129 419 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 AL163195.1-201ENST00000496941 348 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 HMGB3P3-201ENST00000510526 400 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 SNORA31.25-201ENST00000517242 134 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 AC127455.1-201ENST00000565496 145 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 MIR3670-2-201ENST00000582974 65 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 MIR3670-1-201ENST00000584160 65 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 MIR3670-3-201ENST00000584855 65 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 AP003357.1-201ENST00000604497 148 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 MIR3670-4-201ENST00000612260 65 ntBASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
IGHV4-28A0A0C4DH34 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNU6-653P-201ENST00000363074 106 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNU6-923P-201ENST00000364753 107 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNVU1-2-201ENST00000516326 135 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNU7-116P-201ENST00000516940 62 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNU6-1096P-201ENST00000517089 102 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 RNU1-104P-201ENST00000517280 175 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 AC024995.1-201ENST00000523014 93 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 AC069114.2-201ENST00000604699 304 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 AC245884.12-201ENST00000615364 59 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 MIR6079-201ENST00000635807 62 ntBASIC1.84□□□□□ -2.11
IGHV4-28A0A0C4DH34 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.84□□□□□ -2.12
IGHV4-28A0A0C4DH34 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC080100.1-201ENST00000624239 5356 ntBASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU4-82P-201ENST00000362443 140 ntBASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.267-201ENST00000364679 109 ntBASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-493P-201ENST00000391321 108 ntBASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 RPS26P45-201ENST00000471748 340 ntBASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNA5SP320-201ENST00000516263 124 ntBASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNU6-1291P-201ENST00000516591 104 ntBASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC100767.1-201ENST00000528178 123 ntBASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC004486.1-201ENST00000546846 233 ntBASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC018630.2-201ENST00000534866 2403 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 ZNF271P-202ENST00000465539 1970 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNA5SP393-201ENST00000363423 117 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 SNORA72-201ENST00000384339 132 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR520G-201ENST00000385064 90 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR27B-201ENST00000385129 97 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNA5SP501-201ENST00000410990 112 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.621-201ENST00000411065 96 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 RNA5SP450-201ENST00000411206 102 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.793-201ENST00000411222 111 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AL513328.1-201ENST00000446460 224 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AL138752.1-201ENST00000452964 351 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC233266.1-201ENST00000454518 96 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.644-201ENST00000459006 113 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.674-201ENST00000516362 113 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 SNORA81.3-201ENST00000517283 198 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC011604.1-201ENST00000545978 196 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC084364.2-201ENST00000546924 395 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR4529-201ENST00000578110 78 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 MIR4435-1-201ENST00000582552 80 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC091178.2-201ENST00000584401 117 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC242852.1-201ENST00000612151 96 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 Y_RNA.802-201ENST00000614892 130 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 U4.3-201ENST00000621047 82 ntBASIC1.82□□□□□ -2.12
IGHV4-28A0A0C4DH34 AC244015.1-201ENST00000622301 99 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms