Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SNCAIPQ9Y6H5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 RNU4-13P-201ENST00000364019 141 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 Y_RNA.521-201ENST00000384560 114 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 SNORA22C-201ENST00000384614 134 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 RNU6-136P-201ENST00000384663 107 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 SNORA67.4-201ENST00000384688 142 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 U6atac.2-201ENST00000408644 118 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 Y_RNA.622-201ENST00000411091 108 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 RNU2-32P-201ENST00000411193 191 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 AL135786.1-201ENST00000415892 214 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 Z96811.1-201ENST00000445880 108 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 RNA5SP490-201ENST00000517141 136 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 AC018630.3-201ENST00000542637 96 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 AC112693.2-201ENST00000556538 232 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 AC127455.1-201ENST00000565496 145 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 AC105245.1-201ENST00000581934 244 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 AL031274.2-201ENST00000599419 203 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 MIR5739-201ENST00000619803 80 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 MIR7157-201ENST00000635801 60 ntBASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNCAIPQ9Y6H5 Z82209.1-201ENST00000422141 2135 ntBASIC3.28□□□□□ -1.89
SNCAIPQ9Y6H5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-1240P-201ENST00000365155 104 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-546P-201ENST00000383991 107 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-1235P-201ENST00000384559 107 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 RNA5SP511-201ENST00000410487 115 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 AC008134.1-201ENST00000420943 193 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 MTND4LP9-201ENST00000427694 174 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-437P-201ENST00000459408 95 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-498P-201ENST00000459468 107 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 RPS27P22-201ENST00000478056 241 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 RPL36AP21-201ENST00000490372 323 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 MIR6817-201ENST00000615588 66 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 ZNF702P-202ENST00000434269 1966 ntBASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNCAIPQ9Y6H5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 RNA5SP68-201ENST00000363885 119 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 SNORA46-201ENST00000384762 135 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-1168P-201ENST00000390831 104 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 AL513477.1-202ENST00000417061 214 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 MICF-203ENST00000432679 129 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 RN7SL633P-201ENST00000488974 297 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 YWHAEP4-201ENST00000505390 198 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-971P-201ENST00000516920 106 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 MIR6844-201ENST00000637122 62 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 AC093831.2-201ENST00000624393 3427 ntBASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNCAIPQ9Y6H5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 RNU4-41P-201ENST00000364426 143 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 SNORD50B-201ENST00000364995 70 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 MIR887-201ENST00000401258 79 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 FO393413.1-201ENST00000402892 195 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-735P-201ENST00000410612 107 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-1211P-201ENST00000459179 105 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 RN7SL75P-201ENST00000461926 281 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 AC008413.1-201ENST00000511864 177 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 AL590808.1-201ENST00000618696 141 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 AC009487.2-201ENST00000420969 6821 ntBASIC3.25□□□□□ -1.89
SNCAIPQ9Y6H5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 Y_RNA.420-201ENST00000384043 110 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 RNY3P5-201ENST00000384127 102 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 RNU6-768P-201ENST00000384683 107 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 Y_RNA.587-201ENST00000391210 103 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 AC016909.1-201ENST00000415916 166 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 AC010154.1-201ENST00000425857 269 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 AL161788.1-201ENST00000441805 169 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 AC010531.2-201ENST00000465012 153 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 RNA5SP148-201ENST00000516527 94 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 AC012640.5-201ENST00000623897 319 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 AC006435.5-201ENST00000624486 112 ntBASIC3.24□□□□□ -1.89
SNCAIPQ9Y6H5 AC009487.4-201ENST00000624969 3585 ntBASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 AC080128.1-201ENST00000474389 1917 ntBASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 SNORA70B-201ENST00000384210 135 ntBASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 Y_RNA.542-201ENST00000384641 111 ntBASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 AL512604.1-201ENST00000404812 257 ntBASIC3.23□□□□□ -1.89
SNCAIPQ9Y6H5 AC009969.1-201ENST00000438726 172 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms