Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 RPL23AP50-201ENST00000434149 455 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 AC091021.1-201ENST00000468051 388 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 SCARNA16.2-201ENST00000516520 172 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 RN7SKP49-201ENST00000516675 260 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 RNU7-30P-201ENST00000516835 62 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 MIR4778-201ENST00000577635 80 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 AC005899.2-201ENST00000584353 90 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 MIR8070-201ENST00000616510 88 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 AC092794.2-201ENST00000620933 563 ntBASIC1.09□□□□□ -2.23
AP4B1Q9Y6B7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 RNU4-76P-201ENST00000364509 141 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-318P-201ENST00000384283 103 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-376P-201ENST00000384731 106 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 MIR499A-201ENST00000384903 122 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 SNORA75.4-201ENST00000391278 119 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 MIR1287-201ENST00000408492 90 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 DYNLT3P2-201ENST00000442517 295 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-625P-201ENST00000459412 107 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 AC116353.2-201ENST00000505332 712 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 RNA5SP168-201ENST00000516642 112 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-307P-201ENST00000516743 106 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-922P-201ENST00000516753 99 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 RNU2-56P-201ENST00000516826 190 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-165P-201ENST00000517170 99 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 AL513534.2-201ENST00000603836 250 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 U6.115-201ENST00000636045 103 ntBASIC1.08□□□□□ -2.24
AP4B1Q9Y6B7 MIR410-201ENST00000362222 80 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-767P-201ENST00000384132 107 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 MIR562-201ENST00000384894 95 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 RNA5SP475-201ENST00000410568 110 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 RAB28P5-201ENST00000427490 651 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 CALM2P4-201ENST00000430810 426 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 RPL17P19-201ENST00000489069 552 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 SNORA40.9-201ENST00000515895 93 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-341P-201ENST00000516973 96 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 AP002001.1-203ENST00000534002 267 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 AC091178.2-201ENST00000584401 117 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 MIR1244-1-201ENST00000612829 85 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 MIR1244-3-201ENST00000635744 85 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 MIR1244-2-201ENST00000636449 85 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 MIR3674-201ENST00000636576 68 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 MIR1244-4-202ENST00000636813 85 ntBASIC1.07□□□□□ -2.24
AP4B1Q9Y6B7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-199P-201ENST00000362954 107 ntBASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-424P-201ENST00000384367 105 ntBASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-192P-201ENST00000391253 100 ntBASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 FGF7P6-202ENST00000451282 293 ntBASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-1278P-201ENST00000516130 107 ntBASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 AC091895.1-201ENST00000624494 256 ntBASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
AP4B1Q9Y6B7 SNORA1B-201ENST00000362535 133 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-454P-201ENST00000364292 107 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 U8.16-201ENST00000391279 133 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 MIR873-201ENST00000401120 77 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 AL137792.2-201ENST00000443484 235 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 OR9P1P-201ENST00000496431 281 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 RNU7-28P-201ENST00000516759 62 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-1213P-201ENST00000517075 94 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 AP002004.2-201ENST00000531656 154 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 AL022345.2-201ENST00000606307 135 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 AC027335.2-201ENST00000624030 375 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 CASC19-280ENST00000642102 1351 ntBASIC1.05□□□□□ -2.24
AP4B1Q9Y6B7 AC005592.1-201ENST00000566527 1640 ntBASIC1.04□□□□□ -2.24
AP4B1Q9Y6B7 RNU6-99P-201ENST00000364721 107 ntBASIC1.04□□□□□ -2.24
AP4B1Q9Y6B7 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
AP4B1Q9Y6B7 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
AP4B1Q9Y6B7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
AP4B1Q9Y6B7 SNORD12B-201ENST00000410433 91 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms