Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AL035470.1-201ENST00000622571 220 ntBASIC3.4□□□□□ -1.87
GPC6Q9Y625 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
GPC6Q9Y625 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GPC6Q9Y625 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
GPC6Q9Y625 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.39□□□□□ -1.87
GPC6Q9Y625 AC091153.1-201ENST00000466297 402 ntBASIC3.39□□□□□ -1.87
GPC6Q9Y625 Y_RNA.714-201ENST00000517065 90 ntBASIC3.39□□□□□ -1.87
GPC6Q9Y625 AL355297.2-201ENST00000604792 129 ntBASIC3.39□□□□□ -1.87
GPC6Q9Y625 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GPC6Q9Y625 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
GPC6Q9Y625 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GPC6Q9Y625 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GPC6Q9Y625 ZNF271P-202ENST00000465539 1970 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.38□□□□□ -1.87
GPC6Q9Y625 MIR340-201ENST00000362125 95 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 RNU6-766P-201ENST00000362478 107 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 SNORD68-201ENST00000363214 84 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 RNU1-96P-201ENST00000364163 162 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 SNORA51.10-201ENST00000384418 136 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 RNU6-905P-201ENST00000384434 107 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 MIR548A2-201ENST00000384956 97 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 RNU11-5P-201ENST00000391216 129 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 SNORA48.7-201ENST00000391302 135 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 AL117342.1-201ENST00000404861 406 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.38□□□□□ -1.87
GPC6Q9Y625 RPL39P34-201ENST00000477141 156 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 COX6CP6-201ENST00000490840 228 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 RNU6-113P-201ENST00000516653 101 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
GPC6Q9Y625 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
GPC6Q9Y625 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
GPC6Q9Y625 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC6Q9Y625 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC6Q9Y625 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC6Q9Y625 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
GPC6Q9Y625 AC018630.2-201ENST00000534866 2403 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 SNORA33-201ENST00000363664 130 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 RNU6-1131P-201ENST00000364955 107 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 RNU6-690P-201ENST00000365242 106 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 MIR518F-201ENST00000384973 87 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 RNU2-63P-201ENST00000410792 194 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 AL357552.1-201ENST00000445254 415 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.37□□□□□ -1.87
GPC6Q9Y625 RNU1-142P-201ENST00000516682 145 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 RN7SKP282-201ENST00000516824 299 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 RNU7-128P-201ENST00000517247 62 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC6Q9Y625 AC039056.2-201ENST00000622261 511 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 MIR376A2-201ENST00000636782 80 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC6Q9Y625 AL589743.1-201ENST00000551932 2712 ntBASIC3.37□□□□□ -1.87
GPC6Q9Y625 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GPC6Q9Y625 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.37□□□□□ -1.87
GPC6Q9Y625 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC6Q9Y625 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GPC6Q9Y625 MIR148B-201ENST00000362252 99 ntBASIC3.36□□□□□ -1.87
GPC6Q9Y625 RNU6-414P-201ENST00000363705 104 ntBASIC3.36□□□□□ -1.87
GPC6Q9Y625 Y_RNA.328-201ENST00000365208 113 ntBASIC3.36□□□□□ -1.87
GPC6Q9Y625 SNORA2.2-201ENST00000365473 135 ntBASIC3.36□□□□□ -1.87
GPC6Q9Y625 MIR548O-201ENST00000408583 114 ntBASIC3.36□□□□□ -1.87
GPC6Q9Y625 MICF-203ENST00000432679 129 ntBASIC3.36□□□□□ -1.87
GPC6Q9Y625 SCARNA15-202ENST00000516881 127 ntBASIC3.36□□□□□ -1.87
GPC6Q9Y625 RNU7-70P-201ENST00000516941 66 ntBASIC3.36□□□□□ -1.87
GPC6Q9Y625 RNU6-667P-201ENST00000517186 102 ntBASIC3.36□□□□□ -1.87
GPC6Q9Y625 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GPC6Q9Y625 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
GPC6Q9Y625 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.36□□□□□ -1.87
GPC6Q9Y625 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
GPC6Q9Y625 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GPC6Q9Y625 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GPC6Q9Y625 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GPC6Q9Y625 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GPC6Q9Y625 AL161912.2-201ENST00000565707 3007 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GPC6Q9Y625 MIR30E-201ENST00000362104 92 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 SNORD73B-201ENST00000364394 72 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 Y_RNA.348-201ENST00000365403 103 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 RNU6-1014P-201ENST00000383940 103 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 SNORA8-201ENST00000384574 139 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 AL049830.1-201ENST00000468034 425 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 RNA5SP385-201ENST00000515947 110 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 RNU6-341P-201ENST00000516973 96 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 AC034105.4-201ENST00000568304 277 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 MIR4506-201ENST00000584693 77 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.35□□□□□ -1.87
GPC6Q9Y625 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
GPC6Q9Y625 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
GPC6Q9Y625 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
GPC6Q9Y625 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
GPC6Q9Y625 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GPC6Q9Y625 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
GPC6Q9Y625 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GPC6Q9Y625 SNORA1B-201ENST00000362535 133 ntBASIC3.34□□□□□ -1.87
GPC6Q9Y625 Y_RNA.49-201ENST00000362714 112 ntBASIC3.34□□□□□ -1.87
GPC6Q9Y625 RNU6-640P-201ENST00000363693 105 ntBASIC3.34□□□□□ -1.87
GPC6Q9Y625 RNU6-294P-201ENST00000364999 102 ntBASIC3.34□□□□□ -1.87
GPC6Q9Y625 MIR23B-201ENST00000384832 97 ntBASIC3.34□□□□□ -1.87
GPC6Q9Y625 MIR181B1-201ENST00000385240 110 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms