Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC073413.2-201ENST00000604332 360 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 MIRLET7G-201ENST00000362280 84 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 SNORD113-8-201ENST00000363497 74 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU4-30P-201ENST00000410245 143 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU2-61P-201ENST00000411069 191 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 FTH1P12-201ENST00000432137 551 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 AC010655.3-201ENST00000478818 450 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 HMGB3P17-201ENST00000504195 649 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 RNA5SP200-201ENST00000516360 103 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 MIR514B-201ENST00000516774 80 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 AC005336.3-201ENST00000623833 2679 ntBASIC2.46□□□□□ -2.02
COL4A3BPQ9Y5P4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 AC018630.2-201ENST00000534866 2403 ntBASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 Y_RNA.145-201ENST00000363527 102 ntBASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 Y_RNA.329-201ENST00000365209 107 ntBASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 POLR2KP2-201ENST00000438155 177 ntBASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 RPL23AP63-201ENST00000498752 471 ntBASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 MIR6132-201ENST00000622083 109 ntBASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.45□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU6-661P-201ENST00000362409 107 ntBASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 Y_RNA.19-201ENST00000362462 99 ntBASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU4-90P-201ENST00000362773 141 ntBASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 Y_RNA.214-201ENST00000364201 112 ntBASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 AC113618.1-201ENST00000416747 285 ntBASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 AC104435.1-201ENST00000483483 166 ntBASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 AC025465.3-201ENST00000510570 311 ntBASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 RNA5SP437-201ENST00000517249 129 ntBASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 AL096840.1-201ENST00000603287 93 ntBASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.44□□□□□ -2.02
COL4A3BPQ9Y5P4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU6-360P-201ENST00000390944 104 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 SNORA48.3-201ENST00000391081 134 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU6-1248P-201ENST00000391096 64 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 Y_RNA.602-201ENST00000410535 92 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 COX6CP10-201ENST00000416832 224 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 ELOCP20-201ENST00000422460 345 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 HMGN2P19-201ENST00000425149 265 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 HSPE1P9-201ENST00000440046 311 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 AL731563.1-201ENST00000442202 214 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU6-966P-201ENST00000516479 104 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 SNORA31.11-201ENST00000516528 139 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 AC007742.2-201ENST00000618226 398 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 MIR6079-201ENST00000635807 62 ntBASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
COL4A3BPQ9Y5P4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 AL356292.1-201ENST00000283110 373 ntBASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU6-117P-201ENST00000365415 107 ntBASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 MIR520G-201ENST00000385064 90 ntBASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 Y_RNA.581-201ENST00000391017 97 ntBASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 RPL21P1-201ENST00000399532 476 ntBASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 MTND4LP30-201ENST00000454092 297 ntBASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU6-1337P-201ENST00000516525 95 ntBASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 SNORA44.1-201ENST00000517031 108 ntBASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL4A3BPQ9Y5P4 SNORD81.1-201ENST00000363064 77 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU6-414P-201ENST00000363705 104 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 SNORA63C-201ENST00000364578 129 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 Y_RNA.383-201ENST00000383855 97 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 SNORA80E-201ENST00000384744 137 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 RNA5SP109-201ENST00000391010 116 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 AC245047.3-201ENST00000429428 127 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 MTND5P22-201ENST00000458380 195 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 LINC01399-202ENST00000458450 244 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 snoU13.27-201ENST00000459278 104 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 RNU6-496P-201ENST00000516145 99 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 IGKV3-31-201ENST00000523109 329 ntBASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
COL4A3BPQ9Y5P4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
COL4A3BPQ9Y5P4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
COL4A3BPQ9Y5P4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-738P-201ENST00000384531 106 ntBASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 SNORA64-201ENST00000384674 134 ntBASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-713P-201ENST00000384761 107 ntBASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 MIR676-201ENST00000390702 67 ntBASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 MIR4709-201ENST00000577272 72 ntBASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 DEFB117-201ENST00000602356 141 ntBASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 PRR13P7-201ENST00000605538 430 ntBASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 AC037487.3-201ENST00000606668 112 ntBASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.4□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU4-13P-201ENST00000364019 141 ntBASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 Y_RNA.222-201ENST00000364264 102 ntBASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 RNU6-855P-201ENST00000410395 104 ntBASIC2.39□□□□□ -2.03
COL4A3BPQ9Y5P4 RN7SKP200-201ENST00000410564 320 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms