Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MIR4643-201ENST00000577473 78 ntBASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SSX2IPQ9Y2D8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 SNORD114-1-201ENST00000362705 72 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.82-201ENST00000363000 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.92-201ENST00000363043 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.235-201ENST00000364412 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.306-201ENST00000365015 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.312-201ENST00000365089 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.322-201ENST00000365151 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.332-201ENST00000365271 113 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 SNORA25B-201ENST00000365507 128 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.361-201ENST00000365515 120 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-418P-201ENST00000384035 107 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AL355497.1-201ENST00000406262 551 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.590-201ENST00000410140 107 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 RNU2-61P-201ENST00000411069 191 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-57P-201ENST00000411348 103 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AC008134.1-201ENST00000420943 193 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AC009238.1-201ENST00000442165 424 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AC009237.6-201ENST00000446969 424 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AC016717.1-201ENST00000448918 286 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 snoU13.23-201ENST00000458863 104 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.650-201ENST00000459002 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AC018868.1-201ENST00000491307 315 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.679-201ENST00000516416 91 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.777-201ENST00000516982 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 DEFB122-202ENST00000569013 197 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.771-201ENST00000598668 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.789-201ENST00000622480 102 ntBASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SSX2IPQ9Y2D8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.122-201ENST00000363331 96 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 SNORD14D-201ENST00000384390 87 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 RNU2-14P-201ENST00000411053 191 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 Z98949.2-201ENST00000440996 144 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 AL357134.1-201ENST00000445848 426 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 AC079804.2-201ENST00000490376 200 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 AC010598.1-201ENST00000510378 103 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-991P-201ENST00000516168 107 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 AC025754.2-201ENST00000606491 432 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 AL159152.1-201ENST00000635019 2587 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 AC005336.3-201ENST00000623833 2679 ntBASIC2.44□□□□□ -2.02
SSX2IPQ9Y2D8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.217-201ENST00000364214 105 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-662P-201ENST00000384253 104 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-1289P-201ENST00000384431 106 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 AL139156.1-201ENST00000412785 841 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 SRIP3-201ENST00000413200 219 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 MTCO1P44-201ENST00000441935 243 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.641-201ENST00000459414 105 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 SNORA4.4-201ENST00000515921 135 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.700-201ENST00000516806 100 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 MIR4282-201ENST00000583613 67 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 MIR6132-201ENST00000622083 109 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 MIR219B-201ENST00000637023 88 ntBASIC2.43□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.76-201ENST00000362931 109 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.117-201ENST00000363294 101 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-271P-201ENST00000363858 105 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.200-201ENST00000364018 102 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 MIR1298-201ENST00000408783 112 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 AC010531.2-201ENST00000465012 153 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 COX6CP14-201ENST00000469580 174 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 AC025647.1-201ENST00000517879 253 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 NDUFA5P6-201ENST00000542110 379 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 AC012640.5-201ENST00000623897 319 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 AC006435.5-201ENST00000624486 112 ntBASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
SSX2IPQ9Y2D8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 Y_RNA.292-201ENST00000364904 97 ntBASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-1240P-201ENST00000365155 104 ntBASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 SNORA20B-201ENST00000384220 132 ntBASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 MIR873-201ENST00000401120 77 ntBASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 PRELID3BP1-201ENST00000457142 540 ntBASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 SNORD65B-201ENST00000459126 73 ntBASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 RNU6-138P-201ENST00000515952 107 ntBASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 AC130289.1-201ENST00000577321 73 ntBASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.41□□□□□ -2.02
SSX2IPQ9Y2D8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms