Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.11□□□□□ -2.23
RNF6Q9Y252 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.11□□□□□ -2.23
RNF6Q9Y252 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.11□□□□□ -2.23
RNF6Q9Y252 AC092991.1-201ENST00000477176 376 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 AL133373.1-201ENST00000497098 94 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 RNA5SP20-201ENST00000515976 84 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 RNU6-358P-201ENST00000516564 75 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 RNU6-922P-201ENST00000516753 99 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 RNU2-56P-201ENST00000516826 190 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 AC060780.3-201ENST00000589464 80 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 SNORA28-201ENST00000606769 126 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 MIR6734-201ENST00000621166 68 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 AL513423.1-201ENST00000621695 132 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 AC139792.2-201ENST00000624218 587 ntBASIC1.11□□□□□ -2.23
RNF6Q9Y252 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RNF6Q9Y252 Y_RNA.88-201ENST00000363029 99 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 RNU4-76P-201ENST00000364509 141 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 Y_RNA.404-201ENST00000383978 102 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 RNU6-1145P-201ENST00000384246 107 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 Y_RNA.482-201ENST00000384377 111 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 SNORA12.1-201ENST00000390873 148 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 RNA5SP475-201ENST00000410568 110 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 AC018865.2-201ENST00000423631 129 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.1□□□□□ -2.23
RNF6Q9Y252 HSPE1P13-201ENST00000451143 297 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 RPL39P38-201ENST00000467018 153 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 AC091021.1-201ENST00000468051 388 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 SCARNA16.2-201ENST00000516520 172 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 RNU7-30P-201ENST00000516835 62 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.1□□□□□ -2.23
RNF6Q9Y252 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.1□□□□□ -2.23
RNF6Q9Y252 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.1□□□□□ -2.23
RNF6Q9Y252 AC011604.1-201ENST00000545978 196 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 AC018448.1-201ENST00000552843 316 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 MIR1244-1-201ENST00000612829 85 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 AC092794.2-201ENST00000620933 563 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 MIR1244-3-201ENST00000635744 85 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 MIR1244-2-201ENST00000636449 85 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 MIR1244-4-202ENST00000636813 85 ntBASIC1.1□□□□□ -2.23
RNF6Q9Y252 Y_RNA.72-201ENST00000362894 103 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 RNU6-505P-201ENST00000384427 107 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 MIR660-201ENST00000385235 97 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 RNU11-5P-201ENST00000391216 129 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 SNORA75.4-201ENST00000391278 119 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.09□□□□□ -2.23
RNF6Q9Y252 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.09□□□□□ -2.23
RNF6Q9Y252 RNU6-625P-201ENST00000459412 107 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.09□□□□□ -2.23
RNF6Q9Y252 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.09□□□□□ -2.23
RNF6Q9Y252 AC005899.2-201ENST00000584353 90 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 RMST_2.1-201ENST00000617263 136 ntBASIC1.09□□□□□ -2.23
RNF6Q9Y252 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RNF6Q9Y252 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RNF6Q9Y252 Y_RNA.339-201ENST00000365325 102 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 RNU6-136P-201ENST00000384663 107 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RNF6Q9Y252 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.08□□□□□ -2.24
RNF6Q9Y252 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.08□□□□□ -2.24
RNF6Q9Y252 CALM2P4-201ENST00000430810 426 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
RNF6Q9Y252 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.08□□□□□ -2.24
RNF6Q9Y252 AC093852.1-201ENST00000503587 266 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.08□□□□□ -2.24
RNF6Q9Y252 AC074133.1-201ENST00000515696 183 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 RNU6-947P-201ENST00000516264 106 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 RNU6-1291P-201ENST00000516591 104 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 RNA5SP168-201ENST00000516642 112 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 RNU6-307P-201ENST00000516743 106 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 RNU6-1213P-201ENST00000517075 94 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 MIR3684-201ENST00000579779 74 ntBASIC1.08□□□□□ -2.24
RNF6Q9Y252 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.08□□□□□ -2.24
RNF6Q9Y252 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 SNORA27.1-201ENST00000362604 124 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 RNU1-93P-201ENST00000364704 169 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 RNU6-767P-201ENST00000384132 107 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 MIR222-201ENST00000384992 110 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 AC114482.1-201ENST00000418010 247 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 AC233266.1-201ENST00000454518 96 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 MIR2053-201ENST00000459295 91 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 SNORA40.9-201ENST00000515895 93 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 RN7SKP49-201ENST00000516675 260 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 AC242852.1-201ENST00000612151 96 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.07□□□□□ -2.24
RNF6Q9Y252 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 AC244015.1-201ENST00000622301 99 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 MIR3674-201ENST00000636576 68 ntBASIC1.07□□□□□ -2.24
RNF6Q9Y252 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RNF6Q9Y252 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
RNF6Q9Y252 RNU6-199P-201ENST00000362954 107 ntBASIC1.06□□□□□ -2.24
RNF6Q9Y252 RNU6-99P-201ENST00000364721 107 ntBASIC1.06□□□□□ -2.24
RNF6Q9Y252 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.06□□□□□ -2.24
RNF6Q9Y252 U8.16-201ENST00000391279 133 ntBASIC1.06□□□□□ -2.24
RNF6Q9Y252 RAB28P5-201ENST00000427490 651 ntBASIC1.06□□□□□ -2.24
RNF6Q9Y252 AC093850.1-201ENST00000454121 251 ntBASIC1.06□□□□□ -2.24
RNF6Q9Y252 RPL17P19-201ENST00000489069 552 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms