Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NOD1Q9Y239 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NOD1Q9Y239 FAM35DP-201ENST00000323387 2712 ntBASIC3.64□□□□□ -1.83
NOD1Q9Y239 RNU1-96P-201ENST00000364163 162 ntBASIC3.64□□□□□ -1.83
NOD1Q9Y239 RNU1-89P-201ENST00000384592 164 ntBASIC3.64□□□□□ -1.83
NOD1Q9Y239 AL603914.1-201ENST00000401964 204 ntBASIC3.64□□□□□ -1.83
NOD1Q9Y239 RNU5E-3P-201ENST00000515913 68 ntBASIC3.64□□□□□ -1.83
NOD1Q9Y239 Y_RNA.709-201ENST00000516952 92 ntBASIC3.64□□□□□ -1.83
NOD1Q9Y239 RNU6-365P-201ENST00000517113 106 ntBASIC3.64□□□□□ -1.83
NOD1Q9Y239 RNU2-60P-201ENST00000517290 128 ntBASIC3.64□□□□□ -1.83
NOD1Q9Y239 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NOD1Q9Y239 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.64□□□□□ -1.83
NOD1Q9Y239 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NOD1Q9Y239 RNU1-18P-201ENST00000363062 164 ntBASIC3.63□□□□□ -1.83
NOD1Q9Y239 RPS15AP28-201ENST00000435088 386 ntBASIC3.63□□□□□ -1.83
NOD1Q9Y239 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.63□□□□□ -1.83
NOD1Q9Y239 AC233266.1-201ENST00000454518 96 ntBASIC3.63□□□□□ -1.83
NOD1Q9Y239 AC011406.1-201ENST00000512440 370 ntBASIC3.63□□□□□ -1.83
NOD1Q9Y239 RPL23AP94-201ENST00000512518 302 ntBASIC3.63□□□□□ -1.83
NOD1Q9Y239 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.63□□□□□ -1.83
NOD1Q9Y239 AC242852.1-201ENST00000612151 96 ntBASIC3.63□□□□□ -1.83
NOD1Q9Y239 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NOD1Q9Y239 AC244015.1-201ENST00000622301 99 ntBASIC3.63□□□□□ -1.83
NOD1Q9Y239 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
NOD1Q9Y239 snoU2-30.2-201ENST00000362805 70 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 RNU6-283P-201ENST00000364788 107 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 SNORD21-201ENST00000383953 95 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 RNA5SP127-201ENST00000411051 133 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 RNU7-99P-201ENST00000516271 62 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 CYCSP26-201ENST00000534107 320 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 AL360157.1-201ENST00000565962 87 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 AC007229.1-201ENST00000590455 412 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 AC108081.1-201ENST00000604358 221 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 MIR7106-201ENST00000612419 65 ntBASIC3.62□□□□□ -1.83
NOD1Q9Y239 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NOD1Q9Y239 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NOD1Q9Y239 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NOD1Q9Y239 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NOD1Q9Y239 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
NOD1Q9Y239 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.61□□□□□ -1.83
NOD1Q9Y239 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NOD1Q9Y239 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.61□□□□□ -1.83
NOD1Q9Y239 Y_RNA.66-201ENST00000362862 102 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 RNU6-309P-201ENST00000364573 106 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 Y_RNA.510-201ENST00000384511 114 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 MIR561-201ENST00000385216 97 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 Y_RNA.630-201ENST00000411370 108 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 NDUFA4P2-201ENST00000489989 244 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 MIR2114-201ENST00000516645 80 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 RNU1-104P-201ENST00000517280 175 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 AC007751.1-201ENST00000529260 376 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.61□□□□□ -1.83
NOD1Q9Y239 AC022149.2-201ENST00000621061 203 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 AL137790.1-201ENST00000634283 177 ntBASIC3.61□□□□□ -1.83
NOD1Q9Y239 Y_RNA.52-201ENST00000362760 96 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 RNU6-508P-201ENST00000363231 103 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 RNA5SP322-201ENST00000363617 119 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 RNU6-647P-201ENST00000364243 107 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 MIR624-201ENST00000385217 97 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 RNU11-5P-201ENST00000391216 129 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 ARF4P2-201ENST00000430209 526 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 HMGN1P7-201ENST00000491722 313 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 SNORD33.1-201ENST00000516213 88 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 RNU6-589P-201ENST00000516485 107 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 RNU6-1291P-201ENST00000516591 104 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 RNU6-667P-201ENST00000517186 102 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 AC091178.2-201ENST00000584401 117 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 AL365205.2-201ENST00000594586 68 ntBASIC3.6□□□□□ -1.83
NOD1Q9Y239 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NOD1Q9Y239 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.6□□□□□ -1.83
NOD1Q9Y239 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NOD1Q9Y239 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
NOD1Q9Y239 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NOD1Q9Y239 MIR592-201ENST00000384959 97 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 RNA5SP467-201ENST00000391274 118 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.59□□□□□ -1.83
NOD1Q9Y239 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.59□□□□□ -1.83
NOD1Q9Y239 RN7SL93P-201ENST00000463035 293 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 CYCTP-201ENST00000504253 315 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 RNU6-1041P-201ENST00000516254 102 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 RNU6-504P-201ENST00000516568 104 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 RNU7-128P-201ENST00000517247 62 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.59□□□□□ -1.83
NOD1Q9Y239 AL670379.3-201ENST00000605040 251 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 uc_338.1-201ENST00000612113 180 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 AL136360.1-201ENST00000503377 1900 ntBASIC3.59□□□□□ -1.83
NOD1Q9Y239 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NOD1Q9Y239 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NOD1Q9Y239 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
NOD1Q9Y239 AC017071.1-201ENST00000564407 2204 ntBASIC3.59□□□□□ -1.84
NOD1Q9Y239 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
NOD1Q9Y239 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
NOD1Q9Y239 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NOD1Q9Y239 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
NOD1Q9Y239 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NOD1Q9Y239 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NOD1Q9Y239 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NOD1Q9Y239 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.58□□□□□ -1.84
NOD1Q9Y239 SNORA5B-201ENST00000363786 132 ntBASIC3.58□□□□□ -1.84
NOD1Q9Y239 SNORA80A-201ENST00000363922 136 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms