Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RPL23AP6-201ENST00000446637 472 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 AC104435.1-201ENST00000483483 166 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 AP002001.1-203ENST00000534002 267 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 MIR4299-201ENST00000577899 72 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 U4.1-201ENST00000620349 87 ntBASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.06□□□□□ -1.92
CDK11AQ9UQ88 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.26-201ENST00000362539 101 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 RNU6-1164P-201ENST00000364428 107 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.338-201ENST00000365320 114 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.446-201ENST00000384178 104 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.512-201ENST00000384518 102 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 MIR568-201ENST00000385036 95 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 RNU11-3P-201ENST00000391111 133 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 AL445685.2-201ENST00000422551 342 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 RNU6-155P-201ENST00000516347 100 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 MIR5089-201ENST00000580047 84 ntBASIC3.05□□□□□ -1.92
CDK11AQ9UQ88 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.101-201ENST00000363154 102 ntBASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 Y_RNA.461-201ENST00000384263 103 ntBASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 RPL21P38-201ENST00000418090 167 ntBASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 RNU1-131P-201ENST00000458943 161 ntBASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 MRPS17P9-201ENST00000511924 393 ntBASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 AC055872.1-201ENST00000570978 278 ntBASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 AL096840.1-201ENST00000603287 93 ntBASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 U1.36-201ENST00000620684 176 ntBASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDK11AQ9UQ88 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 SNORD81.1-201ENST00000363064 77 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 RNU6-454P-201ENST00000364292 107 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 RNU4-30P-201ENST00000410245 143 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 AC244636.1-201ENST00000421152 228 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 TRBVB-201ENST00000477100 408 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 AC098869.1-201ENST00000481627 292 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 RNU6-496P-201ENST00000516145 99 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 RNU6-856P-201ENST00000516959 98 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 RNU2-12P-201ENST00000517216 168 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 AL590240.4-201ENST00000616908 390 ntBASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CDK11AQ9UQ88 RNU6-1240P-201ENST00000365155 104 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.452-201ENST00000384202 108 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 SNORA8-201ENST00000384574 139 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 RNU6-1146P-201ENST00000516282 102 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 RNU6-570P-201ENST00000517051 105 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 AC025647.1-201ENST00000517879 253 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 AP005660.1-201ENST00000522972 293 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 MIR4498-201ENST00000577599 66 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 AC037487.3-201ENST00000606668 112 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 AL773524.1-201ENST00000614065 229 ntBASIC3.02□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.84-201ENST00000363011 104 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.238-201ENST00000364441 102 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.376-201ENST00000365638 108 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 SNORA53-201ENST00000391141 249 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 MTND4LP30-201ENST00000454092 297 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 AC004817.2-201ENST00000561794 651 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 MIR3683-201ENST00000580847 82 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 MIR4503-201ENST00000582187 83 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 MIR3149-201ENST00000584629 83 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 U6.115-201ENST00000636045 103 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CDK11AQ9UQ88 snoU2_19.2-201ENST00000363024 80 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 RNU6-324P-201ENST00000363957 106 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.243-201ENST00000364481 109 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 RNU6-702P-201ENST00000364982 107 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 RNU6-290P-201ENST00000365212 101 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 MIR597-201ENST00000384968 97 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 MIR1253-201ENST00000408273 105 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 POLR2KP2-201ENST00000438155 177 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 AC090255.1-201ENST00000495779 349 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 HMGB3P17-201ENST00000504195 649 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3□□□□□ -1.93
CDK11AQ9UQ88 AP000942.4-201ENST00000604811 241 ntBASIC3□□□□□ -1.93
CDK11AQ9UQ88 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
CDK11AQ9UQ88 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 AL159152.1-201ENST00000635019 2587 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 RNU6-23P-201ENST00000363283 107 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 Y_RNA.288-201ENST00000364854 92 ntBASIC2.99□□□□□ -1.93
CDK11AQ9UQ88 MIR215-201ENST00000384858 110 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms