Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 XIST_intron.1-201ENST00000619444 68 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 AP001486.2-201ENST00000561652 5113 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-1209P-201ENST00000363655 107 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-60P-201ENST00000364792 103 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 RNU1-73P-201ENST00000383971 164 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 MIR1290-201ENST00000408735 78 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.607-201ENST00000410597 98 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 RNU4-47P-201ENST00000410876 114 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 AC245102.2-201ENST00000448956 180 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 EIF4A1P12-201ENST00000551910 141 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 AC022523.2-201ENST00000561045 150 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 MIR3163-201ENST00000581592 73 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 MIR2681-201ENST00000581814 105 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 AL034555.1-201ENST00000604816 211 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 MIR548BB-201ENST00000626714 66 ntBASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PDZRN3Q9UPQ7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-944P-201ENST00000364023 107 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.531-201ENST00000384589 121 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 SNORD77.3-201ENST00000391113 65 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 RNA5SP511-201ENST00000410487 115 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 AC092047.1-201ENST00000424997 240 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 HMGN2P20-201ENST00000437531 273 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 AC010401.1-201ENST00000463867 348 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 UBE2DNL-203ENST00000474922 222 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 RPL23AP94-201ENST00000512518 302 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-1231P-201ENST00000517185 103 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 EIF4BP1-201ENST00000554881 351 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 AC145423.2-201ENST00000610631 239 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 AC002546.1-201ENST00000588041 2504 ntBASIC4.35□□□□□ -1.71
PDZRN3Q9UPQ7 AC002543.1-201ENST00000299783 1954 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 RNA5SP374-201ENST00000362939 125 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-832P-201ENST00000363319 107 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-1280P-201ENST00000365211 107 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-690P-201ENST00000365242 106 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.454-201ENST00000384224 113 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 SNORD61-201ENST00000384252 73 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-616P-201ENST00000384353 107 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 RNY1P4-201ENST00000384595 115 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 MIR577-201ENST00000385196 96 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 MIR591-201ENST00000385290 95 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 RPL32P35-201ENST00000415214 394 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 TOMM22P1-201ENST00000418578 312 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 SNRPGP10-201ENST00000432323 225 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 AL353705.1-201ENST00000433468 480 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 snoU13.4-201ENST00000458916 104 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 RN7SL504P-201ENST00000494496 287 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 RNA5SP468-201ENST00000516782 93 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 MIR4694-201ENST00000578534 80 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 AC021443.1-201ENST00000604478 211 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 MIR376A2-201ENST00000636782 80 ntBASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDZRN3Q9UPQ7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.34□□□□□ -1.72
PDZRN3Q9UPQ7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.34□□□□□ -1.72
PDZRN3Q9UPQ7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDZRN3Q9UPQ7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 AC091564.4-201ENST00000533934 2194 ntBASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 Y_RNA.191-201ENST00000363972 113 ntBASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 RNA5SP129-201ENST00000410276 118 ntBASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 RNU4-69P-201ENST00000410677 143 ntBASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 CYCSP48-201ENST00000417124 323 ntBASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 NDUFA4P2-201ENST00000489989 244 ntBASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 MIR4712-201ENST00000583750 82 ntBASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 FTX_3.1-201ENST00000610451 147 ntBASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-349P-201ENST00000362402 107 ntBASIC4.32□□□□□ -1.72
PDZRN3Q9UPQ7 AL590383.1-201ENST00000428602 75 ntBASIC4.32□□□□□ -1.72
PDZRN3Q9UPQ7 AC113410.1-201ENST00000505029 247 ntBASIC4.32□□□□□ -1.72
PDZRN3Q9UPQ7 SNORA70.19-201ENST00000516717 90 ntBASIC4.32□□□□□ -1.72
PDZRN3Q9UPQ7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.32□□□□□ -1.72
PDZRN3Q9UPQ7 AC091304.10-201ENST00000641554 121 ntBASIC4.32□□□□□ -1.72
PDZRN3Q9UPQ7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.32□□□□□ -1.72
PDZRN3Q9UPQ7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDZRN3Q9UPQ7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-888P-201ENST00000363010 101 ntBASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 RNU6-271P-201ENST00000363858 105 ntBASIC4.31□□□□□ -1.72
PDZRN3Q9UPQ7 Y_RNA.545-201ENST00000384652 105 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms