Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 RNU6-888P-201ENST00000363010 101 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 RNU1-96P-201ENST00000364163 162 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 Y_RNA.528-201ENST00000384575 108 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 MIR1253-201ENST00000408273 105 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 MIR1302-4-201ENST00000408701 150 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 RN7SKP284-201ENST00000411002 343 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 RPS12P18-201ENST00000442381 270 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 MRPS17P9-201ENST00000511924 393 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 SNORA70.18-201ENST00000516696 98 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 PRELID2P1-201ENST00000552837 301 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 MIR5685-201ENST00000579080 79 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 MIR7157-201ENST00000635801 60 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 FAM35CP-201ENST00000554755 2470 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 AC092435.3-201ENST00000565538 3654 ntBASIC3.3□□□□□ -1.88
TRIM33Q9UPN9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 RNU6-1107P-201ENST00000364817 104 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 MIR570-201ENST00000384917 97 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 MIR134-201ENST00000385258 73 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 RNU11-5P-201ENST00000391216 129 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 RNU6-554P-201ENST00000410466 106 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 RNU2-32P-201ENST00000411193 191 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 AC123900.1-201ENST00000420390 96 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 RPS29P12-201ENST00000460178 152 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 HMGN1P7-201ENST00000491722 313 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 AC093259.1-201ENST00000509755 300 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 MIR7851-201ENST00000610611 160 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM33Q9UPN9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 Y_RNA.242-201ENST00000364473 110 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 RNA5SP125-201ENST00000364843 120 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 SNORD61-201ENST00000384252 73 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 RN7SKP156-201ENST00000410308 342 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 CYCSP19-201ENST00000411715 316 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 CALM2P4-201ENST00000430810 426 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 AC115115.1-201ENST00000449927 248 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 AC007012.1-201ENST00000567192 175 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
TRIM33Q9UPN9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
TRIM33Q9UPN9 SNORD9-201ENST00000362566 104 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 Y_RNA.85-201ENST00000363014 111 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 SNORA62.3-201ENST00000365110 153 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 RN7SKP27-201ENST00000410684 333 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 Y_RNA.621-201ENST00000411065 96 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 SNORD105B-201ENST00000458770 79 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 COX6CP6-201ENST00000490840 228 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 RNU6-1146P-201ENST00000516282 102 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 SCARNA3-201ENST00000517097 143 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 AC008507.4-201ENST00000585464 127 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 AC073413.2-201ENST00000604332 360 ntBASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TRIM33Q9UPN9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 Y_RNA.253-201ENST00000364562 112 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 AL359837.1-201ENST00000381357 287 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 MIR95-201ENST00000385072 81 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 SNORD12C-201ENST00000386307 89 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 AC007064.1-201ENST00000412238 351 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 SNRPGP10-201ENST00000432323 225 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 AC096725.1-201ENST00000514266 313 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 AC034105.4-201ENST00000568304 277 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 AC087685.1-201ENST00000587507 141 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM33Q9UPN9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 RNU6-766P-201ENST00000362478 107 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 RNA5SP119-201ENST00000362715 117 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 RNY4P30-201ENST00000410216 95 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 RN7SKP111-201ENST00000410349 271 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 RPS15AP28-201ENST00000435088 386 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 HMGN2P34-201ENST00000437647 269 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 RN7SL542P-201ENST00000467147 294 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 AC106707.2-201ENST00000484182 374 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 RNU7-99P-201ENST00000516271 62 ntBASIC3.25□□□□□ -1.89
TRIM33Q9UPN9 RNU6-1149P-201ENST00000516810 97 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms