Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 U8.11-201ENST00000384699 133 ntBASIC4.1□□□□□ -1.75
LHX6Q9UPM6 Y_RNA.567-201ENST00000384736 106 ntBASIC4.1□□□□□ -1.75
LHX6Q9UPM6 RNA5SP323-201ENST00000391094 133 ntBASIC4.1□□□□□ -1.75
LHX6Q9UPM6 MIR1265-201ENST00000408444 86 ntBASIC4.1□□□□□ -1.75
LHX6Q9UPM6 RNA5SP146-201ENST00000410743 123 ntBASIC4.1□□□□□ -1.75
LHX6Q9UPM6 U8.18-201ENST00000459285 133 ntBASIC4.1□□□□□ -1.75
LHX6Q9UPM6 AC114811.1-201ENST00000507207 168 ntBASIC4.1□□□□□ -1.75
LHX6Q9UPM6 RNU7-2P-201ENST00000516096 62 ntBASIC4.1□□□□□ -1.75
LHX6Q9UPM6 RNU6-871P-201ENST00000516122 100 ntBASIC4.1□□□□□ -1.75
LHX6Q9UPM6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.1□□□□□ -1.75
LHX6Q9UPM6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LHX6Q9UPM6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LHX6Q9UPM6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.09□□□□□ -1.75
LHX6Q9UPM6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.09□□□□□ -1.75
LHX6Q9UPM6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LHX6Q9UPM6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.09□□□□□ -1.75
LHX6Q9UPM6 RNA5SP482-201ENST00000391269 118 ntBASIC4.09□□□□□ -1.75
LHX6Q9UPM6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.09□□□□□ -1.75
LHX6Q9UPM6 RN7SL504P-201ENST00000494496 287 ntBASIC4.09□□□□□ -1.75
LHX6Q9UPM6 IGLV3-17-201ENST00000519099 244 ntBASIC4.09□□□□□ -1.75
LHX6Q9UPM6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.09□□□□□ -1.75
LHX6Q9UPM6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
LHX6Q9UPM6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LHX6Q9UPM6 AC096644.4-201ENST00000563417 2912 ntBASIC4.08□□□□□ -1.76
LHX6Q9UPM6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 RNU6-1083P-201ENST00000384022 107 ntBASIC4.08□□□□□ -1.76
LHX6Q9UPM6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 RPS26P2-201ENST00000440331 348 ntBASIC4.08□□□□□ -1.76
LHX6Q9UPM6 CPHL1P-201ENST00000461341 3407 ntBASIC4.08□□□□□ -1.76
LHX6Q9UPM6 UBL5P3-201ENST00000475112 231 ntBASIC4.08□□□□□ -1.76
LHX6Q9UPM6 RN7SL812P-201ENST00000493791 279 ntBASIC4.08□□□□□ -1.76
LHX6Q9UPM6 RNU6-1041P-201ENST00000516254 102 ntBASIC4.08□□□□□ -1.76
LHX6Q9UPM6 RNA5SP49-201ENST00000516450 115 ntBASIC4.08□□□□□ -1.76
LHX6Q9UPM6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LHX6Q9UPM6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX6Q9UPM6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LHX6Q9UPM6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX6Q9UPM6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX6Q9UPM6 SNORA8-201ENST00000384574 139 ntBASIC4.07□□□□□ -1.76
LHX6Q9UPM6 RNU6-987P-201ENST00000384759 104 ntBASIC4.07□□□□□ -1.76
LHX6Q9UPM6 RPL23AP48-201ENST00000406913 488 ntBASIC4.07□□□□□ -1.76
LHX6Q9UPM6 RPS29P28-201ENST00000446439 141 ntBASIC4.07□□□□□ -1.76
LHX6Q9UPM6 UBE2DNL-203ENST00000474922 222 ntBASIC4.07□□□□□ -1.76
LHX6Q9UPM6 AC103810.6-201ENST00000606708 136 ntBASIC4.07□□□□□ -1.76
LHX6Q9UPM6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.07□□□□□ -1.76
LHX6Q9UPM6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LHX6Q9UPM6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LHX6Q9UPM6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX6Q9UPM6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 SNORA25.6-201ENST00000364121 118 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 RNU6-411P-201ENST00000384451 107 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 AL357552.1-201ENST00000445254 415 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 RNU7-34P-201ENST00000459394 64 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 RN7SL691P-201ENST00000494487 301 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 RNU6-991P-201ENST00000516168 107 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 SNORA25.13-201ENST00000516395 103 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 uc_338.25-201ENST00000613756 156 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 MIR6500-201ENST00000622700 86 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 AC092435.4-201ENST00000623012 4159 ntBASIC4.06□□□□□ -1.76
LHX6Q9UPM6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.06□□□□□ -1.76
LHX6Q9UPM6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LHX6Q9UPM6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LHX6Q9UPM6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.05□□□□□ -1.76
LHX6Q9UPM6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LHX6Q9UPM6 RNU4-32P-201ENST00000363404 141 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 SNORA32-201ENST00000384072 121 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 MIR515-2-201ENST00000384883 83 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 MIR515-1-201ENST00000384884 83 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 MIR183-201ENST00000384958 110 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 MIR767-201ENST00000390228 109 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 MIR548G-201ENST00000408442 89 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 RNA5SP38-201ENST00000410750 119 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 SNORA57.3-201ENST00000411095 141 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 RNU1-98P-201ENST00000458992 160 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.05□□□□□ -1.76
LHX6Q9UPM6 AL592156.1-201ENST00000508758 304 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 RNU2-58P-201ENST00000516403 183 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 RNU7-28P-201ENST00000516759 62 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 AC024995.1-201ENST00000523014 93 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX6Q9UPM6 AL513043.2-201ENST00000573941 143 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
LHX6Q9UPM6 AC087190.4-201ENST00000574616 8334 ntBASIC4.05□□□□□ -1.76
LHX6Q9UPM6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LHX6Q9UPM6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms