Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AL162725.1-201ENST00000435405 301 ntBASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 RNU6-437P-201ENST00000459408 95 ntBASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 RNU6-826P-201ENST00000516827 104 ntBASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BRPF3Q9ULD4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 RNU1-22P-201ENST00000363334 158 ntBASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 Y_RNA.568-201ENST00000384742 113 ntBASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 MIR15B-201ENST00000385045 98 ntBASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 MIR524-201ENST00000385242 87 ntBASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 AP001486.1-201ENST00000463339 476 ntBASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 RNU6-561P-201ENST00000516222 102 ntBASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 RNU6-856P-201ENST00000516959 98 ntBASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 MIR4438-201ENST00000585271 93 ntBASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.48□□□□□ -1.85
BRPF3Q9ULD4 AC131280.1-202ENST00000624067 4211 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 MIR340-201ENST00000362125 95 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 MIR422A-201ENST00000362286 90 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 SNORA71.1-201ENST00000364523 117 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 RNU6-728P-201ENST00000365375 104 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 RNU6-136P-201ENST00000384663 107 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 RNU6-376P-201ENST00000384731 106 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 RNA5SP274-201ENST00000410484 108 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 AC006461.1-201ENST00000412637 326 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 RNU6-667P-201ENST00000517186 102 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 U4atac.1-201ENST00000618345 95 ntBASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
BRPF3Q9ULD4 RNU6-674P-201ENST00000363831 107 ntBASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 MIR592-201ENST00000384959 97 ntBASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 MIR1253-201ENST00000408273 105 ntBASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 AC018868.1-201ENST00000491307 315 ntBASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 AC097462.1-201ENST00000514125 324 ntBASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 RNA5SP341-201ENST00000516261 117 ntBASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 DNAJC19P2-201ENST00000593340 302 ntBASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BRPF3Q9ULD4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 RNA5SP125-201ENST00000364843 120 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 Y_RNA.291-201ENST00000364886 113 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 Y_RNA.337-201ENST00000365312 102 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 RNU6-643P-201ENST00000384018 107 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 RNY3P5-201ENST00000384127 102 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 RNU7-172P-201ENST00000517125 64 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 MIR3670-2-201ENST00000582974 65 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 MIR3670-1-201ENST00000584160 65 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 MIR3670-3-201ENST00000584855 65 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 MIR3670-4-201ENST00000612260 65 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 U2.20-201ENST00000613956 192 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 AC012640.5-201ENST00000623897 319 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 AC091895.1-201ENST00000624494 256 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 MIR3658-201ENST00000636291 56 ntBASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
BRPF3Q9ULD4 RNU4-41P-201ENST00000364426 143 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 RNU4-11P-201ENST00000365287 132 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 SNORA72-201ENST00000384339 132 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 MIR569-201ENST00000385228 96 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 MIR1278-201ENST00000408753 81 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 AC060773.1-201ENST00000421698 310 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 RNU7-26P-201ENST00000458980 63 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 RNU6-426P-201ENST00000516464 97 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 MIR548X2-201ENST00000579776 100 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 MIR3200-201ENST00000580767 85 ntBASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
BRPF3Q9ULD4 SNORA67.1-201ENST00000364749 141 ntBASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 SNORA9-201ENST00000384215 133 ntBASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 RNU6-1072P-201ENST00000384703 107 ntBASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 RNU6-443P-201ENST00000384780 107 ntBASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 RNA5SP496-201ENST00000391240 109 ntBASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 AL512604.1-201ENST00000404812 257 ntBASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 AC011753.1-201ENST00000451001 220 ntBASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.43□□□□□ -1.86
BRPF3Q9ULD4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BRPF3Q9ULD4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.42□□□□□ -1.86
BRPF3Q9ULD4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
BRPF3Q9ULD4 SNORA25B-201ENST00000365507 128 ntBASIC3.42□□□□□ -1.86
BRPF3Q9ULD4 RN7SKP101-201ENST00000411376 320 ntBASIC3.42□□□□□ -1.86
BRPF3Q9ULD4 HMGN2P34-201ENST00000437647 269 ntBASIC3.42□□□□□ -1.86
BRPF3Q9ULD4 RPS4XP11-201ENST00000446897 772 ntBASIC3.42□□□□□ -1.86
BRPF3Q9ULD4 S100A11P2-201ENST00000467589 312 ntBASIC3.42□□□□□ -1.86
BRPF3Q9ULD4 AL162274.2-201ENST00000614406 332 ntBASIC3.42□□□□□ -1.86
BRPF3Q9ULD4 U6.73-201ENST00000619194 103 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms