Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL513423.1-201ENST00000621695 132 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
CLCF1Q9UBD9 MIR410-201ENST00000362222 80 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 RNA5SP361-201ENST00000362686 118 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.166-201ENST00000363730 102 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.279-201ENST00000364763 95 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 RNU6-939P-201ENST00000384634 107 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 AL355796.1-201ENST00000406706 323 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 RNA5SP475-201ENST00000410568 110 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1□□□□□ -2.25
CLCF1Q9UBD9 RNA5SP20-201ENST00000515976 84 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 MIR2355-201ENST00000517199 87 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 MIR6504-201ENST00000613520 61 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 AL357075.2-201ENST00000614906 189 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 MIR8065-201ENST00000620577 100 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 MIR6079-201ENST00000635807 62 ntBASIC1□□□□□ -2.25
CLCF1Q9UBD9 RNU6-407P-201ENST00000365280 104 ntBASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 AL591704.2-201ENST00000421658 181 ntBASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.635-201ENST00000459041 101 ntBASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 U8.22-201ENST00000459141 133 ntBASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 RNU6-625P-201ENST00000459412 107 ntBASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 RPL39P38-201ENST00000467018 153 ntBASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 MIR3664-201ENST00000579074 99 ntBASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 SNORD3E-202ENST00000627253 216 ntBASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.99□□□□□ -2.25
CLCF1Q9UBD9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 SNORA27.1-201ENST00000362604 124 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 RNU6-1310P-201ENST00000384153 107 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 RNU6-876P-201ENST00000391295 104 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.619-201ENST00000410951 90 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 AC114482.1-201ENST00000418010 247 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 AC018865.2-201ENST00000423631 129 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 STAG3L5P-204ENST00000443759 179 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 SUMO1P2-201ENST00000452524 304 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 MIR2053-201ENST00000459295 91 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.691-201ENST00000516611 103 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 RN7SKP88-201ENST00000516847 250 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 AL050343.2-201ENST00000607338 280 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 7SK.8-201ENST00000612110 250 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 7SK.11-201ENST00000615477 250 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 7SK.13-201ENST00000622040 250 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 MIR3674-201ENST00000636576 68 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 AL669831.3-213ENST00000636676 183 ntBASIC0.98□□□□□ -2.25
CLCF1Q9UBD9 MIR96-201ENST00000362288 78 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.248-201ENST00000364501 109 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.265-201ENST00000364677 108 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU6-99P-201ENST00000364721 107 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 SNORA25.8-201ENST00000364831 128 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU6-1080P-201ENST00000383982 107 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU6-318P-201ENST00000384283 103 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU6-376P-201ENST00000384731 106 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 MIR660-201ENST00000385235 97 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 MT-TL1-201ENST00000386347 75 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RAB28P5-201ENST00000427490 651 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 SNORA40.9-201ENST00000515895 93 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU6-1278P-201ENST00000516130 107 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU7-28P-201ENST00000516759 62 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU2-56P-201ENST00000516826 190 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU6-341P-201ENST00000516973 96 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU6-264P-201ENST00000517134 104 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 AC019288.1-201ENST00000557918 224 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 MIR1244-1-201ENST00000612829 85 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 MIR1244-3-201ENST00000635744 85 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 U6.115-201ENST00000636045 103 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 MIR1244-2-201ENST00000636449 85 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 MIR1244-4-202ENST00000636813 85 ntBASIC0.97□□□□□ -2.25
CLCF1Q9UBD9 RNU6-1301P-201ENST00000362724 104 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 RNU4-76P-201ENST00000364509 141 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.505-201ENST00000384489 102 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 MIR625-201ENST00000385047 85 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 SNORA12.1-201ENST00000390873 148 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 MIR873-201ENST00000401120 77 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 MIR1285-1-201ENST00000408593 84 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 SNORD12B-201ENST00000410433 91 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 MTND1P2-201ENST00000430604 821 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 AC091021.1-201ENST00000468051 388 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.673-201ENST00000516306 88 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 MIR5690-201ENST00000583739 73 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 AL513534.2-201ENST00000603836 250 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 TPTEP1-208ENST00000636884 213 ntBASIC0.96□□□□□ -2.26
CLCF1Q9UBD9 RNA5SP327-201ENST00000362494 101 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 SNORD114-7-201ENST00000362520 77 ntBASIC0.95□□□□□ -2.26
CLCF1Q9UBD9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms