Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBP1Q9NZI7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
UBP1Q9NZI7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
UBP1Q9NZI7 MIR422A-201ENST00000362286 90 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 Y_RNA.203-201ENST00000364106 102 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 RNU6-1130P-201ENST00000365434 107 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 Y_RNA.400-201ENST00000383963 111 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 MIR15B-201ENST00000385045 98 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 MIR29C-201ENST00000385231 88 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 RNU4-43P-201ENST00000410628 137 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3□□□□□ -1.93
UBP1Q9NZI7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3□□□□□ -1.93
UBP1Q9NZI7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3□□□□□ -1.93
UBP1Q9NZI7 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3□□□□□ -1.93
UBP1Q9NZI7 CYCSP26-201ENST00000534107 320 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3□□□□□ -1.93
UBP1Q9NZI7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3□□□□□ -1.93
UBP1Q9NZI7 AC073413.2-201ENST00000604332 360 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 AL021707.8-201ENST00000609428 183 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
UBP1Q9NZI7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3□□□□□ -1.93
UBP1Q9NZI7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3□□□□□ -1.93
UBP1Q9NZI7 AC100821.1-201ENST00000523153 2479 ntBASIC3□□□□□ -1.93
UBP1Q9NZI7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3□□□□□ -1.93
UBP1Q9NZI7 Y_RNA.337-201ENST00000365312 102 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 MIR562-201ENST00000384894 95 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 AL031121.1-201ENST00000406553 254 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.99□□□□□ -1.93
UBP1Q9NZI7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.99□□□□□ -1.93
UBP1Q9NZI7 AC022018.1-201ENST00000430685 241 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 AC023449.1-201ENST00000454464 154 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 RNU6-346P-201ENST00000516288 111 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 RNU1-142P-201ENST00000516682 145 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 AC024995.1-201ENST00000523014 93 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.99□□□□□ -1.93
UBP1Q9NZI7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.99□□□□□ -1.93
UBP1Q9NZI7 MIR5195-201ENST00000583555 115 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 AL929325.1-201ENST00000603096 117 ntBASIC2.99□□□□□ -1.93
UBP1Q9NZI7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UBP1Q9NZI7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.99□□□□□ -1.93
UBP1Q9NZI7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
UBP1Q9NZI7 RNU6-704P-201ENST00000364162 103 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 RNU6-643P-201ENST00000384018 107 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 RNU2-55P-201ENST00000411146 174 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 CST2P1-201ENST00000425770 87 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.98□□□□□ -1.93
UBP1Q9NZI7 RNA5SP341-201ENST00000516261 117 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 RNU7-128P-201ENST00000517247 62 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 AP001485.1-201ENST00000604799 199 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 AL162274.2-201ENST00000614406 332 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 Y_RNA.778-201ENST00000620203 90 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.98□□□□□ -1.93
UBP1Q9NZI7 U2.22-201ENST00000636441 106 ntBASIC2.98□□□□□ -1.93
UBP1Q9NZI7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.98□□□□□ -1.93
UBP1Q9NZI7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.98□□□□□ -1.93
UBP1Q9NZI7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
UBP1Q9NZI7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UBP1Q9NZI7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UBP1Q9NZI7 AC018630.2-201ENST00000534866 2403 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 SNORA38-201ENST00000363946 132 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 Y_RNA.343-201ENST00000365354 112 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 AL117342.1-201ENST00000404861 406 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 RNU7-26P-201ENST00000458980 63 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 YWHAEP4-201ENST00000505390 198 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.97□□□□□ -1.93
UBP1Q9NZI7 AC012640.5-201ENST00000623897 319 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 AC132825.6-201ENST00000638861 357 ntBASIC2.97□□□□□ -1.93
UBP1Q9NZI7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
UBP1Q9NZI7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
UBP1Q9NZI7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.96□□□□□ -1.94
UBP1Q9NZI7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
UBP1Q9NZI7 RNA5SP493-201ENST00000364115 91 ntBASIC2.96□□□□□ -1.94
UBP1Q9NZI7 RNA5SP467-201ENST00000391274 118 ntBASIC2.96□□□□□ -1.94
UBP1Q9NZI7 SNORA79-201ENST00000408376 140 ntBASIC2.96□□□□□ -1.94
UBP1Q9NZI7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.96□□□□□ -1.94
UBP1Q9NZI7 RNU7-94P-201ENST00000459576 63 ntBASIC2.96□□□□□ -1.94
UBP1Q9NZI7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.96□□□□□ -1.94
UBP1Q9NZI7 AL358944.1-201ENST00000528537 144 ntBASIC2.96□□□□□ -1.94
UBP1Q9NZI7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
UBP1Q9NZI7 DNAJC19P2-201ENST00000593340 302 ntBASIC2.96□□□□□ -1.94
UBP1Q9NZI7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
UBP1Q9NZI7 AC008264.2-201ENST00000610193 3731 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
UBP1Q9NZI7 AL157777.2-201ENST00000258070 137 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 RNU6-23P-201ENST00000363283 107 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 Y_RNA.488-201ENST00000384403 102 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 RNA5SP323-201ENST00000391094 133 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 Y_RNA.587-201ENST00000391210 103 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 Z92545.1-201ENST00000411782 234 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 AC006461.1-201ENST00000412637 326 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 AL109933.2-201ENST00000452651 260 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.95□□□□□ -1.94
UBP1Q9NZI7 RNU6-341P-201ENST00000516973 96 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms