Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.41□□□□□ -2.02
DDX56Q9NY93 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX56Q9NY93 AL096840.1-201ENST00000603287 93 ntBASIC2.41□□□□□ -2.02
DDX56Q9NY93 SNORD113-5-201ENST00000607261 78 ntBASIC2.41□□□□□ -2.02
DDX56Q9NY93 CTSLP2-204ENST00000629029 392 ntBASIC2.41□□□□□ -2.02
DDX56Q9NY93 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.41□□□□□ -2.02
DDX56Q9NY93 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
DDX56Q9NY93 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
DDX56Q9NY93 SNORD81.1-201ENST00000363064 77 ntBASIC2.4□□□□□ -2.03
DDX56Q9NY93 Y_RNA.361-201ENST00000365515 120 ntBASIC2.4□□□□□ -2.03
DDX56Q9NY93 RNU6-376P-201ENST00000384731 106 ntBASIC2.4□□□□□ -2.03
DDX56Q9NY93 RNU6-360P-201ENST00000390944 104 ntBASIC2.4□□□□□ -2.03
DDX56Q9NY93 MTND3P2-201ENST00000438452 342 ntBASIC2.4□□□□□ -2.03
DDX56Q9NY93 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX56Q9NY93 HSPE1P13-201ENST00000451143 297 ntBASIC2.4□□□□□ -2.03
DDX56Q9NY93 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX56Q9NY93 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX56Q9NY93 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
DDX56Q9NY93 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.4□□□□□ -2.03
DDX56Q9NY93 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.39□□□□□ -2.03
DDX56Q9NY93 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
DDX56Q9NY93 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.39□□□□□ -2.03
DDX56Q9NY93 Y_RNA.149-201ENST00000363558 117 ntBASIC2.39□□□□□ -2.03
DDX56Q9NY93 RNU6-505P-201ENST00000384427 107 ntBASIC2.39□□□□□ -2.03
DDX56Q9NY93 COX6CP10-201ENST00000416832 224 ntBASIC2.39□□□□□ -2.03
DDX56Q9NY93 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.39□□□□□ -2.03
DDX56Q9NY93 HSPE1P25-201ENST00000455484 251 ntBASIC2.39□□□□□ -2.03
DDX56Q9NY93 RPL23AP63-201ENST00000498752 471 ntBASIC2.39□□□□□ -2.03
DDX56Q9NY93 MTCO2P24-201ENST00000515611 426 ntBASIC2.39□□□□□ -2.03
DDX56Q9NY93 RNU6-496P-201ENST00000516145 99 ntBASIC2.39□□□□□ -2.03
DDX56Q9NY93 AC046143.2-201ENST00000609789 160 ntBASIC2.39□□□□□ -2.03
DDX56Q9NY93 U6.108-201ENST00000637764 58 ntBASIC2.39□□□□□ -2.03
DDX56Q9NY93 AC018630.2-201ENST00000534866 2403 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 RNU6-661P-201ENST00000362409 107 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 RNU6-414P-201ENST00000363705 104 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 RNU6-713P-201ENST00000384761 107 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 Y_RNA.581-201ENST00000391017 97 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 AL135786.1-201ENST00000415892 214 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 MTCYBP9-201ENST00000431021 303 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 HSPE1P9-201ENST00000440046 311 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 TRBV12-1-201ENST00000479785 344 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 RNU6-436P-201ENST00000516171 114 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 RNU6-570P-201ENST00000517051 105 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 AC073413.2-201ENST00000604332 360 ntBASIC2.38□□□□□ -2.03
DDX56Q9NY93 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DDX56Q9NY93 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
DDX56Q9NY93 Y_RNA.329-201ENST00000365209 107 ntBASIC2.37□□□□□ -2.03
DDX56Q9NY93 Y_RNA.376-201ENST00000365638 108 ntBASIC2.37□□□□□ -2.03
DDX56Q9NY93 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
DDX56Q9NY93 MIR676-201ENST00000390702 67 ntBASIC2.37□□□□□ -2.03
DDX56Q9NY93 RPL23AP42-201ENST00000471152 471 ntBASIC2.37□□□□□ -2.03
DDX56Q9NY93 RNU7-128P-201ENST00000517247 62 ntBASIC2.37□□□□□ -2.03
DDX56Q9NY93 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.37□□□□□ -2.03
DDX56Q9NY93 MIR8062-201ENST00000621515 85 ntBASIC2.37□□□□□ -2.03
DDX56Q9NY93 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.37□□□□□ -2.03
DDX56Q9NY93 IGHVIII-44-202ENST00000636235 289 ntBASIC2.37□□□□□ -2.03
DDX56Q9NY93 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
DDX56Q9NY93 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
DDX56Q9NY93 Y_RNA.84-201ENST00000363011 104 ntBASIC2.36□□□□□ -2.03
DDX56Q9NY93 Y_RNA.124-201ENST00000363339 93 ntBASIC2.36□□□□□ -2.03
DDX56Q9NY93 Y_RNA.383-201ENST00000383855 97 ntBASIC2.36□□□□□ -2.03
DDX56Q9NY93 Y_RNA.541-201ENST00000384640 113 ntBASIC2.36□□□□□ -2.03
DDX56Q9NY93 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
DDX56Q9NY93 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX56Q9NY93 snoU13.27-201ENST00000459278 104 ntBASIC2.36□□□□□ -2.03
DDX56Q9NY93 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX56Q9NY93 RNA5SP437-201ENST00000517249 129 ntBASIC2.36□□□□□ -2.03
DDX56Q9NY93 SNORD53-201ENST00000579969 78 ntBASIC2.36□□□□□ -2.03
DDX56Q9NY93 SCARNA15.3-201ENST00000626315 122 ntBASIC2.36□□□□□ -2.03
DDX56Q9NY93 SCARNA4.1-201ENST00000628597 123 ntBASIC2.36□□□□□ -2.03
DDX56Q9NY93 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX56Q9NY93 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.36□□□□□ -2.03
DDX56Q9NY93 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
DDX56Q9NY93 RNU4-90P-201ENST00000362773 141 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 MIR520G-201ENST00000385064 90 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 RNU6-1248P-201ENST00000391096 64 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 RNU2-61P-201ENST00000411069 191 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 OOSP1P1-201ENST00000423265 274 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 AC245047.3-201ENST00000429428 127 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 AC104435.1-201ENST00000483483 166 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 MIR4709-201ENST00000577272 72 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 MIR3162-201ENST00000581818 82 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
DDX56Q9NY93 AL359851.1-201ENST00000569460 4997 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 Y_RNA.16-201ENST00000362421 102 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 MT-TW-201ENST00000387382 68 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 RN7SKP200-201ENST00000410564 320 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 POLR2KP2-201ENST00000438155 177 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX56Q9NY93 AL161670.1-201ENST00000554348 137 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 MIR3145-201ENST00000580727 82 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 DEFB117-201ENST00000602356 141 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 MIR6079-201ENST00000635807 62 ntBASIC2.34□□□□□ -2.03
DDX56Q9NY93 Y_RNA.111-201ENST00000363248 100 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 Y_RNA.396-201ENST00000383949 103 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 Y_RNA.461-201ENST00000384263 103 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 RNU6-574P-201ENST00000384265 107 ntBASIC2.33□□□□□ -2.04
DDX56Q9NY93 Y_RNA.510-201ENST00000384511 114 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms