Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC120024.3-201ENST00000603167 156 ntBASIC2.61□□□□□ -1.99
PARPBPQ9NWS1 RPL17P51-201ENST00000605218 238 ntBASIC2.61□□□□□ -1.99
PARPBPQ9NWS1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
PARPBPQ9NWS1 TUG1_4.1-201ENST00000619464 181 ntBASIC2.61□□□□□ -1.99
PARPBPQ9NWS1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PARPBPQ9NWS1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 SNORD114-7-201ENST00000362520 77 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 RNU6-1323P-201ENST00000384025 107 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 MIR1294-201ENST00000408503 142 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 SNORD88.1-201ENST00000408684 91 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 RNU4-43P-201ENST00000410628 137 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 HMGN2P35-201ENST00000412164 270 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 AC010598.1-201ENST00000510378 103 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 MIR3646-201ENST00000578301 84 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 AC005972.2-201ENST00000604690 348 ntBASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.6□□□□□ -1.99
PARPBPQ9NWS1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 RNU6-915P-201ENST00000364943 103 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 RNU6-429P-201ENST00000384582 108 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 MIR300-201ENST00000401138 83 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 RNU6-437P-201ENST00000459408 95 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 AC080013.2-201ENST00000460866 323 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 AC090515.1-201ENST00000465295 476 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 AC025647.1-201ENST00000517879 253 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 AP001328.1-201ENST00000528550 176 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 AC015720.1-201ENST00000565251 277 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 AL929325.1-201ENST00000603096 117 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 AP001340.1-201ENST00000624405 217 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 MIR1248-201ENST00000629190 106 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 AC110079.1-202ENST00000635213 138 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 CENPCP1-201ENST00000533085 2578 ntBASIC2.59□□□□□ -1.99
PARPBPQ9NWS1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PARPBPQ9NWS1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
PARPBPQ9NWS1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
PARPBPQ9NWS1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PARPBPQ9NWS1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PARPBPQ9NWS1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PARPBPQ9NWS1 RNU6-235P-201ENST00000362644 107 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 RNU6-153P-201ENST00000364422 104 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 RNU6-117P-201ENST00000365415 107 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 SNORA48.2-201ENST00000390926 124 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 RNA5SP354-201ENST00000391247 136 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 RNU2-52P-201ENST00000410680 190 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 AC010531.2-201ENST00000465012 153 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 SCARNA13-201ENST00000516672 275 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.58□□□□□ -2
PARPBPQ9NWS1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.58□□□□□ -2
PARPBPQ9NWS1 MIR3200-201ENST00000580767 85 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 AL049861.1-201ENST00000603130 150 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 AC005000.2-201ENST00000605468 310 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 AL021707.8-201ENST00000609428 183 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 AC013412.1-201ENST00000610687 192 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 UCA1.1-201ENST00000620952 75 ntBASIC2.58□□□□□ -2
PARPBPQ9NWS1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.58□□□□□ -2
PARPBPQ9NWS1 AL159152.1-201ENST00000635019 2587 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PARPBPQ9NWS1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PARPBPQ9NWS1 SNORA63.4-201ENST00000362763 126 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 RNU1-105P-201ENST00000363470 161 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 RNU4-41P-201ENST00000364426 143 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 SNORD31B-201ENST00000364977 69 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 MIR181A2-201ENST00000384863 110 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 MIR128-1-201ENST00000384921 82 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 MIR627-201ENST00000384979 97 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 SNORA75.5-201ENST00000391291 81 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 RN7SKP101-201ENST00000411376 320 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 RNA5SP112-201ENST00000515937 99 ntBASIC2.57□□□□□ -2
PARPBPQ9NWS1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.57□□□□□ -2
PARPBPQ9NWS1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.57□□□□□ -2
PARPBPQ9NWS1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PARPBPQ9NWS1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.57□□□□□ -2
PARPBPQ9NWS1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.56□□□□□ -2
PARPBPQ9NWS1 RNU6-484P-201ENST00000384016 107 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 RNY3P5-201ENST00000384127 102 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 MIR218-1-201ENST00000384999 110 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 RPL30P4-201ENST00000429309 333 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.56□□□□□ -2
PARPBPQ9NWS1 RPL36AP21-201ENST00000490372 323 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 PRELID2P1-201ENST00000552837 301 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PARPBPQ9NWS1 MIR378D2-201ENST00000580636 98 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 MIR3117-201ENST00000584034 78 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 U7.2-201ENST00000607576 63 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 AC090115.4-201ENST00000609970 188 ntBASIC2.56□□□□□ -2
PARPBPQ9NWS1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PARPBPQ9NWS1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.56□□□□□ -2
PARPBPQ9NWS1 RNU6-508P-201ENST00000363231 103 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 404.4 ms