Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
DDX4Q9NQI0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
DDX4Q9NQI0 MIR378A-201ENST00000362177 66 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 Y_RNA.164-201ENST00000363709 102 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 Y_RNA.210-201ENST00000364161 110 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 MIR1253-201ENST00000408273 105 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 RNU6-130P-201ENST00000411112 103 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
DDX4Q9NQI0 AP1B1P2-201ENST00000416196 106 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 BX510359.4-201ENST00000423750 193 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2□□□□□ -2.09
DDX4Q9NQI0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2□□□□□ -2.09
DDX4Q9NQI0 AC010655.3-201ENST00000478818 450 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 MRPS35P2-201ENST00000508242 191 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 AC011406.1-201ENST00000512440 370 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 RNU6-397P-201ENST00000516226 104 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 RNU6-327P-201ENST00000516270 127 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 RNU6-1045P-201ENST00000516321 107 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 RNU6-897P-201ENST00000517135 105 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 AP002001.1-203ENST00000534002 267 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2□□□□□ -2.09
DDX4Q9NQI0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2□□□□□ -2.09
DDX4Q9NQI0 AC008737.2-201ENST00000599446 118 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 MIR376A1-201ENST00000616574 68 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 AC006001.4-201ENST00000622243 395 ntBASIC2□□□□□ -2.09
DDX4Q9NQI0 SNORD114-7-201ENST00000362520 77 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 Y_RNA.143-201ENST00000363520 106 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 RNU6-1175P-201ENST00000365200 107 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 MIR515-2-201ENST00000384883 83 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 MIR515-1-201ENST00000384884 83 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 RNU11-3P-201ENST00000391111 133 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 MIR1283-2-201ENST00000408621 87 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 RNU2-54P-201ENST00000410299 190 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 RNA5SP450-201ENST00000411206 102 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 AL158823.1-201ENST00000418441 478 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 AC060773.1-201ENST00000421698 310 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.99□□□□□ -2.09
DDX4Q9NQI0 MTND2P29-201ENST00000438595 412 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 AC005042.3-201ENST00000453230 174 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 RPL23AP3-201ENST00000453844 468 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 RNA5SP57-201ENST00000459463 123 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
DDX4Q9NQI0 AC108729.3-201ENST00000513484 108 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 RNU2-12P-201ENST00000517216 168 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.99□□□□□ -2.09
DDX4Q9NQI0 PRR13P7-201ENST00000605538 430 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 AC022441.3-201ENST00000605737 136 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 AC011373.1-201ENST00000607270 237 ntBASIC1.99□□□□□ -2.09
DDX4Q9NQI0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
DDX4Q9NQI0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 RNU6-271P-201ENST00000363858 105 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 RNU6-454P-201ENST00000364292 107 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 Y_RNA.238-201ENST00000364441 102 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 SNORD48-201ENST00000364953 64 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
DDX4Q9NQI0 AC016909.1-201ENST00000415916 166 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 MTND2P23-201ENST00000422990 651 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 AC010154.1-201ENST00000425857 269 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 AL731563.1-201ENST00000442202 214 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 AL118496.2-201ENST00000448300 230 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 AC010598.1-201ENST00000510378 103 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 AC025465.3-201ENST00000510570 311 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.98□□□□□ -2.09
DDX4Q9NQI0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.98□□□□□ -2.09
DDX4Q9NQI0 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 AC136443.5-201ENST00000603741 370 ntBASIC1.98□□□□□ -2.09
DDX4Q9NQI0 RNU6-770P-201ENST00000363929 105 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 Y_RNA.243-201ENST00000364481 109 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 RNU6-937P-201ENST00000384325 106 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 RNU6-21P-201ENST00000384710 107 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 SNORA67.5-201ENST00000391036 107 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX4Q9NQI0 SEPT14P8-201ENST00000508026 178 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 SNORA70.12-201ENST00000516084 153 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 RNU7-110P-201ENST00000516891 62 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 AL137100.2-201ENST00000555786 315 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX4Q9NQI0 MIR4300-201ENST00000581016 96 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 AL645939.4-201ENST00000604495 135 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 AC005828.6-201ENST00000606610 232 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 SNORD113-5-201ENST00000607261 78 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 U1.36-201ENST00000620684 176 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 U6.115-201ENST00000636045 103 ntBASIC1.97□□□□□ -2.09
DDX4Q9NQI0 Y_RNA.446-201ENST00000384178 104 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 Y_RNA.459-201ENST00000384251 102 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 SNORD115-46-201ENST00000390982 71 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 RPL21P1-201ENST00000399532 476 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 CST2P1-201ENST00000425770 87 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 HMGN2P34-201ENST00000437647 269 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.96□□□□□ -2.1
DDX4Q9NQI0 SNORD65B-201ENST00000459126 73 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 RNU6-155P-201ENST00000516347 100 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 AL117187.1-201ENST00000555482 181 ntBASIC1.96□□□□□ -2.1
DDX4Q9NQI0 AC055872.1-201ENST00000570978 278 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms