Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC136932.1-201ENST00000574771 208 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 MIR4778-201ENST00000577635 80 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 AL513534.2-201ENST00000603836 250 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 AC073544.1-201ENST00000600110 1595 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 AC027514.1-201ENST00000588561 1603 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 Y_RNA.482-201ENST00000384377 111 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 MIR660-201ENST00000385235 97 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 MTCO3P19-201ENST00000415864 321 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 AC107399.1-201ENST00000451226 265 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 HMGN1P7-201ENST00000491722 313 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 SNORA31.2-201ENST00000516019 134 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 SCARNA16.2-201ENST00000516520 172 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 AC022868.1-201ENST00000517767 391 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 AC018448.1-201ENST00000552843 316 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 AC011712.1-201ENST00000588959 234 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 AC104260.1-201ENST00000616660 539 ntBASIC1.02□□□□□ -2.25
POLR1EQ9GZS1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 SNORA27.1-201ENST00000362604 124 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RNU6-454P-201ENST00000364292 107 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RNU6-407P-201ENST00000365280 104 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RNU4-14P-201ENST00000410858 122 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 AC018865.2-201ENST00000423631 129 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RAB28P5-201ENST00000427490 651 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 AC092423.1-201ENST00000430165 186 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 CALM2P4-201ENST00000430810 426 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 PCNPP5-201ENST00000452246 481 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 AC091021.1-201ENST00000468051 388 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RPS23P4-201ENST00000487908 423 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RNA5SP20-201ENST00000515976 84 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RNA5SP168-201ENST00000516642 112 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RNU7-30P-201ENST00000516835 62 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 RNU6-1213P-201ENST00000517075 94 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 AC091178.2-201ENST00000584401 117 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 SNORA28-201ENST00000606769 126 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 MIR1244-1-201ENST00000612829 85 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 MIR1244-3-201ENST00000635744 85 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 MIR1244-2-201ENST00000636449 85 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 MIR1244-4-202ENST00000636813 85 ntBASIC1.01□□□□□ -2.25
POLR1EQ9GZS1 Y_RNA.72-201ENST00000362894 103 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
POLR1EQ9GZS1 Y_RNA.498-201ENST00000384460 102 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 RNU6-910P-201ENST00000390844 107 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 U8.16-201ENST00000391279 133 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1□□□□□ -2.25
POLR1EQ9GZS1 AC074133.1-201ENST00000515696 183 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 RNU6-120P-201ENST00000516077 103 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 RN7SKP49-201ENST00000516675 260 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1□□□□□ -2.25
POLR1EQ9GZS1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 AC139792.2-201ENST00000624218 587 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 U6.115-201ENST00000636045 103 ntBASIC1□□□□□ -2.25
POLR1EQ9GZS1 MIR410-201ENST00000362222 80 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 MIR337-201ENST00000362281 93 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 Y_RNA.124-201ENST00000363339 93 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 Y_RNA.267-201ENST00000364679 109 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 SNORA75.4-201ENST00000391278 119 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 MTCYBP4-201ENST00000401524 249 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 FGF7P6-202ENST00000451282 293 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 MTND4P17-201ENST00000470444 350 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 OR9P1P-201ENST00000496431 281 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 AC116353.2-201ENST00000505332 712 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 AC105758.1-201ENST00000506038 399 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 SNORA40.9-201ENST00000515895 93 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 GHRLOS.1-201ENST00000610995 70 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 AC092794.2-201ENST00000620933 563 ntBASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.99□□□□□ -2.25
POLR1EQ9GZS1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 AC005592.1-201ENST00000566527 1640 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 SNORA1B-201ENST00000362535 133 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 RNU4-79P-201ENST00000362764 141 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 RNU6-199P-201ENST00000362954 107 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 RNU6-99P-201ENST00000364721 107 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 RNU6-424P-201ENST00000384367 105 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 RNU11-5P-201ENST00000391216 129 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 AL137792.2-201ENST00000443484 235 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 UBE2V1P7-201ENST00000446395 340 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 AC093850.1-201ENST00000454121 251 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 RNU6-625P-201ENST00000459412 107 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 RNU6-322P-201ENST00000516010 103 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 RNU6-947P-201ENST00000516264 106 ntBASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.98□□□□□ -2.25
POLR1EQ9GZS1 MIR4661-201ENST00000582720 75 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms