Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 AL162725.1-201ENST00000435405 301 ntBASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 RNU7-99P-201ENST00000516271 62 ntBASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 AC004486.1-201ENST00000546846 233 ntBASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 AC073413.2-201ENST00000604332 360 ntBASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 AC005972.2-201ENST00000604690 348 ntBASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 U6.108-201ENST00000637764 58 ntBASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 Y_RNA.83-201ENST00000363005 113 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 U8.7-201ENST00000364940 136 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 Y_RNA.304-201ENST00000365011 112 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 RNU6-301P-201ENST00000384277 107 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 RNU6-136P-201ENST00000384663 107 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 MIR515-2-201ENST00000384883 83 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 MIR515-1-201ENST00000384884 83 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 RNU11-3P-201ENST00000391111 133 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 AL135938.1-201ENST00000443141 297 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 RPS29P21-201ENST00000496272 170 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 MIR5692C2-201ENST00000577959 77 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 MIR3605-201ENST00000583214 100 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 MIR548AY-201ENST00000617669 107 ntBASIC2.84□□□□□ -1.95
TRIM55Q9BYV6 AP006437.1-201ENST00000641440 3685 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 MIR411-201ENST00000362239 96 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 RNU4-13P-201ENST00000364019 141 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 Y_RNA.297-201ENST00000364950 91 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 RNU6-1323P-201ENST00000384025 107 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 RNA5SP465-201ENST00000391195 109 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 AL355497.1-201ENST00000406262 551 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 AC007064.1-201ENST00000412238 351 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 HMGN2P3-201ENST00000433603 273 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 RPS15AP28-201ENST00000435088 386 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 HMGN2P5-201ENST00000436882 273 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 AC117454.1-201ENST00000491120 168 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 RNU7-115P-201ENST00000516433 55 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 RNU1-142P-201ENST00000516682 145 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 AP003357.1-201ENST00000604497 148 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 AL365265.1-201ENST00000621045 234 ntBASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.83□□□□□ -1.96
TRIM55Q9BYV6 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 AC068700.1-201ENST00000565862 3754 ntBASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 SNORA9.2-201ENST00000365361 133 ntBASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 RNA5SP323-201ENST00000391094 133 ntBASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 AC018634.1-201ENST00000437554 401 ntBASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 RN7SKP132-201ENST00000516001 208 ntBASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 AC024405.2-202ENST00000532731 184 ntBASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.82□□□□□ -1.96
TRIM55Q9BYV6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 SNORA8-201ENST00000384574 139 ntBASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 RNA5SP367-201ENST00000516557 118 ntBASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 RNU7-193P-201ENST00000516723 65 ntBASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 RNU7-116P-201ENST00000516940 62 ntBASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 AC127455.1-201ENST00000565496 145 ntBASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 POLR3GP1-201ENST00000594073 261 ntBASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM55Q9BYV6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 Y_RNA.262-201ENST00000364641 102 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 SNORA11.4-201ENST00000408823 129 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 RPS4XP11-201ENST00000446897 772 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 AC003982.1-202ENST00000469928 248 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 Y_RNA.700-201ENST00000516806 100 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 SNORA31.25-201ENST00000517242 134 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 AC024995.1-201ENST00000523014 93 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 MIR3162-201ENST00000581818 82 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 AC245884.12-201ENST00000615364 59 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 AC080100.1-201ENST00000624239 5356 ntBASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TRIM55Q9BYV6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 MIR26A1-201ENST00000362205 77 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 RNU6-653P-201ENST00000363074 106 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 RNU6-1205P-201ENST00000363625 106 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 Y_RNA.293-201ENST00000364908 93 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 RNU6-209P-201ENST00000384118 107 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 AC105272.1-201ENST00000438604 198 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 RPS26P45-201ENST00000471748 340 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 RNY3P16-201ENST00000516338 101 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 AC100767.1-201ENST00000528178 123 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 MIR4319-201ENST00000577285 85 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 MIR5194-201ENST00000582634 120 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 ELOCP29-201ENST00000588193 334 ntBASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms