Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM56Q9BRZ2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 AL158823.1-201ENST00000418441 478 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 AC063976.3-201ENST00000426849 329 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 MTCO1P44-201ENST00000441935 243 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 RNU7-172P-201ENST00000517125 64 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 AC245166.1-201ENST00000521012 253 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 AC131055.1-201ENST00000584626 316 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 AL929325.1-201ENST00000603096 117 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 AC005000.2-201ENST00000605468 310 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 AC138915.1-201ENST00000565427 1685 ntBASIC3.3□□□□□ -1.88
TRIM56Q9BRZ2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 SNORD18B-201ENST00000365659 72 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 AC104332.2-201ENST00000429959 156 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 CST9LP2-201ENST00000437612 320 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 RPL39P40-201ENST00000445481 146 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 RPS4XP11-201ENST00000446897 772 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 SNORA59A-201ENST00000459326 152 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 RN7SL807P-201ENST00000470923 297 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 PDCD5P2-201ENST00000507570 312 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 RNU6-856P-201ENST00000516959 98 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 CYCSP26-201ENST00000534107 320 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 MIR4662B-201ENST00000579498 81 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 AC097639.2-201ENST00000603159 172 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 AL355297.2-201ENST00000604792 129 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 MIR3651-201ENST00000630427 90 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 MIR3914-2-201ENST00000637339 95 ntBASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM56Q9BRZ2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 RNU6-235P-201ENST00000362644 107 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 RNU6-1336P-201ENST00000383886 109 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 RNU6-136P-201ENST00000384663 107 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 MIR634-201ENST00000385208 97 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 RNU11-5P-201ENST00000391216 129 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 AC245102.2-201ENST00000448956 180 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 RNU6-772P-201ENST00000516042 105 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 NDUFA5P6-201ENST00000542110 379 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 MIR4276-201ENST00000584832 70 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 MIR6129-201ENST00000616087 109 ntBASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM56Q9BRZ2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 U8.1-201ENST00000362843 134 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 RNU1-23P-201ENST00000363361 144 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 Y_RNA.634-201ENST00000364811 113 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 Y_RNA.294-201ENST00000364916 102 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 Y_RNA.525-201ENST00000384570 113 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 RNU6-429P-201ENST00000384582 108 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 MIR1253-201ENST00000408273 105 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 AC005326.1-201ENST00000429197 123 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 AP001486.1-201ENST00000463339 476 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 RNU6-1146P-201ENST00000516282 102 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 RNA5SP380-201ENST00000517190 98 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 AC011604.1-201ENST00000545978 196 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 MTND5P34-201ENST00000568888 325 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 JPX_2.1-201ENST00000614161 69 ntBASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM56Q9BRZ2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 RNU6-220P-201ENST00000390919 107 ntBASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 RNY4P18-201ENST00000391107 89 ntBASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 RNU2-48P-201ENST00000410694 191 ntBASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 AL158147.1-201ENST00000443970 75 ntBASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 SNORD11-201ENST00000459124 84 ntBASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 Y_RNA.709-201ENST00000516952 92 ntBASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 PRELID2P1-201ENST00000552837 301 ntBASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM56Q9BRZ2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 RNU6-461P-201ENST00000364195 107 ntBASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 Y_RNA.280-201ENST00000364765 112 ntBASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 RNA5SP120-201ENST00000410900 112 ntBASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 SRIP3-201ENST00000413200 219 ntBASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 RPL32P35-201ENST00000415214 394 ntBASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 AC092185.1-201ENST00000491371 97 ntBASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 OR9P1P-201ENST00000496431 281 ntBASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 CYCTP-201ENST00000504253 315 ntBASIC3.25□□□□□ -1.89
TRIM56Q9BRZ2 RN7SKP57-201ENST00000517248 293 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms