Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 AC130454.1-201ENST00000622948 401 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 ZNF702P-202ENST00000434269 1966 ntBASIC1.87□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.214-201ENST00000364201 112 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 MIR1185-2-201ENST00000408687 86 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 RNA5SP475-201ENST00000410568 110 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 RNU6-57P-201ENST00000411348 103 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 AL158823.1-201ENST00000418441 478 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 RAB28P5-201ENST00000427490 651 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 RPL23AP6-201ENST00000446637 472 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 AC074290.1-201ENST00000448883 135 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 RNU7-95P-201ENST00000459222 64 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 AC010655.3-201ENST00000478818 450 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 RNU2-34P-201ENST00000516534 121 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 RNU6-1046P-201ENST00000516538 107 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 RNU6-856P-201ENST00000516959 98 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 AP002001.1-203ENST00000534002 267 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 AC055872.1-201ENST00000570978 278 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 SNORA4-201ENST00000584302 138 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 AC136443.5-201ENST00000603741 370 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 MIR6504-201ENST00000613520 61 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 snoZ196.1-201ENST00000625269 89 ntBASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RTP3Q9BQQ7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 AL391987.6-201ENST00000305671 199 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 RNU6-23P-201ENST00000363283 107 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.152-201ENST00000363578 100 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 RNU11-3P-201ENST00000391111 133 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 AC060773.1-201ENST00000421698 310 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 ELOCP20-201ENST00000422460 345 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 AC073910.1-201ENST00000445047 438 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 RNU6-221P-201ENST00000459541 99 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 MRPS35P2-201ENST00000508242 191 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 RNY3P15-201ENST00000516297 97 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 AC004467.1-201ENST00000615678 330 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 MIR3674-201ENST00000636576 68 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 AL359851.1-201ENST00000569460 4997 ntBASIC1.85□□□□□ -2.11
RTP3Q9BQQ7 AL159152.1-201ENST00000635019 2587 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 MIR410-201ENST00000362222 80 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.183-201ENST00000363882 113 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 RNU6-770P-201ENST00000363929 105 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 RNU6-1264P-201ENST00000383891 107 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 RNU6-937P-201ENST00000384325 106 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 MIR597-201ENST00000384968 97 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 MIR7-2-201ENST00000384970 110 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 SUMO2P12-201ENST00000405924 140 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 MIR1276-201ENST00000408707 83 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 RPL23AP3-201ENST00000453844 468 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 SNORA40.15-201ENST00000516884 107 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 Y_RNA.713-201ENST00000517013 96 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 AP005660.1-201ENST00000522972 293 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 AC005176.2-201ENST00000596933 147 ntBASIC1.84□□□□□ -2.11
RTP3Q9BQQ7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
RTP3Q9BQQ7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 RNU6-392P-201ENST00000364926 101 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 RNU6-806P-201ENST00000365147 105 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 RNU6-1310P-201ENST00000384153 107 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 RNA5SP465-201ENST00000391195 109 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 RNA5SP450-201ENST00000411206 102 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 AC004965.1-201ENST00000413033 213 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 AC016909.1-201ENST00000415916 166 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 TOMM22P2-201ENST00000430735 237 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 AC005002.2-201ENST00000438228 269 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 MTND2P29-201ENST00000438595 412 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 AC025647.1-201ENST00000517879 253 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 AC008269.2-201ENST00000561915 1105 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 AC136932.1-201ENST00000574771 208 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 AC022513.1-201ENST00000624512 117 ntBASIC1.83□□□□□ -2.12
RTP3Q9BQQ7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.19-201ENST00000362462 99 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.26-201ENST00000362539 101 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.64-201ENST00000362845 102 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.101-201ENST00000363154 102 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.105-201ENST00000363182 111 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 RNU6-238P-201ENST00000363313 106 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 RNU6-454P-201ENST00000364292 107 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 SNORA72.2-201ENST00000365028 127 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 RNU6-1109P-201ENST00000391187 107 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 RNA5SP212-201ENST00000391223 107 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 RPL21P1-201ENST00000399532 476 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms