Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AC022254.1-201ENST00000567857 235 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 AC055872.1-201ENST00000570978 278 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.81□□□□□ -2.12
PKP2Q99959 AC008873.1-201ENST00000625051 138 ntBASIC1.81□□□□□ -2.12
PKP2Q99959 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.81□□□□□ -2.12
PKP2Q99959 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
PKP2Q99959 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
PKP2Q99959 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PKP2Q99959 Y_RNA.230-201ENST00000364348 109 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 SNORD114-6-201ENST00000364393 72 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 Y_RNA.483-201ENST00000384380 101 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 Y_RNA.570-201ENST00000384750 101 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 MIR1302-6-201ENST00000408466 90 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 RNU5A-5P-201ENST00000411054 116 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 AC009310.1-201ENST00000414414 451 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 AC123900.1-201ENST00000420390 96 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 RAB28P5-201ENST00000427490 651 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 ATP5EP1-201ENST00000510257 156 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 RNU1-117P-201ENST00000517041 158 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 RNU6-570P-201ENST00000517051 105 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 AP002001.1-203ENST00000534002 267 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.8□□□□□ -2.12
PKP2Q99959 MIR4498-201ENST00000577599 66 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 MIR3169-201ENST00000578032 83 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
PKP2Q99959 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.8□□□□□ -2.12
PKP2Q99959 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.8□□□□□ -2.12
PKP2Q99959 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 AC245060.5-201ENST00000610778 3293 ntBASIC1.8□□□□□ -2.12
PKP2Q99959 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
PKP2Q99959 MIR410-201ENST00000362222 80 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 RNU6-545P-201ENST00000362681 104 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 Y_RNA.84-201ENST00000363011 104 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 SNORD113-8-201ENST00000363497 74 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 RNU6-1264P-201ENST00000383891 107 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 Y_RNA.401-201ENST00000383965 117 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 Y_RNA.466-201ENST00000384294 113 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 RNU6-102P-201ENST00000384485 104 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 Y_RNA.518-201ENST00000384552 113 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 MIR586-201ENST00000385035 97 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 Y_RNA.581-201ENST00000391017 97 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 RNU6-1203P-201ENST00000410703 110 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.79□□□□□ -2.12
PKP2Q99959 AC245517.4-201ENST00000448601 281 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 RNU1-131P-201ENST00000458943 161 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 RNU7-14P-201ENST00000459331 62 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 RNU6-496P-201ENST00000516145 99 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 RNU6-295P-201ENST00000516901 104 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.79□□□□□ -2.12
PKP2Q99959 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.79□□□□□ -2.12
PKP2Q99959 AC005176.2-201ENST00000596933 147 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PKP2Q99959 AC092881.1-201ENST00000638218 2733 ntBASIC1.79□□□□□ -2.12
PKP2Q99959 U3.8-201ENST00000363675 217 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 RNU6-1305P-201ENST00000364353 104 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 Y_RNA.288-201ENST00000364854 92 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 RNU6-1175P-201ENST00000365200 107 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 AL023284.1-201ENST00000403956 276 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 Y_RNA.602-201ENST00000410535 92 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.78□□□□□ -2.12
PKP2Q99959 HMGN2P9-201ENST00000476875 229 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 TRBVB-201ENST00000477100 408 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PKP2Q99959 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
PKP2Q99959 RNA5SP445-201ENST00000515889 115 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 RNVU1-2-201ENST00000516326 135 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 RNU6-107P-201ENST00000516643 102 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.78□□□□□ -2.12
PKP2Q99959 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 AC005786.1-201ENST00000588553 154 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 MIR3674-201ENST00000636576 68 ntBASIC1.78□□□□□ -2.12
PKP2Q99959 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PKP2Q99959 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PKP2Q99959 Y_RNA.101-201ENST00000363154 102 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 Y_RNA.286-201ENST00000364813 102 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 SNORD31B-201ENST00000364977 69 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 Y_RNA.541-201ENST00000384640 113 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 SNORA64-201ENST00000384674 134 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 MIR548B-201ENST00000385247 97 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 MIR300-201ENST00000401138 83 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 MIR1283-1-201ENST00000408494 87 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 RNU4-30P-201ENST00000410245 143 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 AL390729.2-201ENST00000416137 156 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 NDUFB4P10-201ENST00000452541 359 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 HSPE1P25-201ENST00000455484 251 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 SNORD127-201ENST00000458892 86 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 RNU6-966P-201ENST00000516479 104 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 RNU7-110P-201ENST00000516891 62 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 AC023157.2-201ENST00000540596 141 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 AC022441.3-201ENST00000605737 136 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 SNORD113-5-201ENST00000607261 78 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 AC011373.1-201ENST00000607270 237 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 AC062037.2-201ENST00000610137 73 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 AC004467.1-201ENST00000615678 330 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 AP001282.2-201ENST00000616149 309 ntBASIC1.77□□□□□ -2.13
PKP2Q99959 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms