Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 MTND1P7-201ENST00000632801 297 ntBASIC3.21□□□□□ -1.9
DUSP9Q99956 MIR338-201ENST00000636369 67 ntBASIC3.21□□□□□ -1.9
DUSP9Q99956 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.21□□□□□ -1.9
DUSP9Q99956 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DUSP9Q99956 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
DUSP9Q99956 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DUSP9Q99956 Y_RNA.111-201ENST00000363248 100 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 SNORA38-201ENST00000363946 132 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 RNU4-84P-201ENST00000364200 139 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 SNORD114-6-201ENST00000364393 72 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 SNORA71.1-201ENST00000364523 117 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 RNU6-125P-201ENST00000384505 107 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 MIR887-201ENST00000401258 79 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 RNU6-1186P-201ENST00000410429 97 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 SEPT7P4-201ENST00000437076 306 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 AC018634.1-201ENST00000437554 401 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 RPS4XP11-201ENST00000446897 772 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 RNU7-26P-201ENST00000458980 63 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 RNU7-200P-201ENST00000516105 62 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 RNU6-453P-201ENST00000516819 85 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 RNU6-789P-201ENST00000517105 102 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 AC109810.1-201ENST00000534066 224 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.2□□□□□ -1.9
DUSP9Q99956 MIR2681-201ENST00000581814 105 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DUSP9Q99956 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
DUSP9Q99956 AC096644.4-201ENST00000563417 2912 ntBASIC3.2□□□□□ -1.9
DUSP9Q99956 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
DUSP9Q99956 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUSP9Q99956 Y_RNA.8-201ENST00000362353 102 ntBASIC3.19□□□□□ -1.9
DUSP9Q99956 RNU1-109P-201ENST00000383960 147 ntBASIC3.19□□□□□ -1.9
DUSP9Q99956 AL590004.2-201ENST00000404787 371 ntBASIC3.19□□□□□ -1.9
DUSP9Q99956 RN7SL499P-201ENST00000481141 276 ntBASIC3.19□□□□□ -1.9
DUSP9Q99956 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
DUSP9Q99956 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DUSP9Q99956 RNU4-41P-201ENST00000364426 143 ntBASIC3.18□□□□□ -1.9
DUSP9Q99956 RNU6-851P-201ENST00000384565 107 ntBASIC3.18□□□□□ -1.9
DUSP9Q99956 MIR29C-201ENST00000385231 88 ntBASIC3.18□□□□□ -1.9
DUSP9Q99956 AL606845.1-201ENST00000404881 255 ntBASIC3.18□□□□□ -1.9
DUSP9Q99956 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.18□□□□□ -1.9
DUSP9Q99956 AC063976.3-201ENST00000426849 329 ntBASIC3.18□□□□□ -1.9
DUSP9Q99956 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.18□□□□□ -1.9
DUSP9Q99956 RNU1-142P-201ENST00000516682 145 ntBASIC3.18□□□□□ -1.9
DUSP9Q99956 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.18□□□□□ -1.9
DUSP9Q99956 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.18□□□□□ -1.9
DUSP9Q99956 AC073413.2-201ENST00000604332 360 ntBASIC3.18□□□□□ -1.9
DUSP9Q99956 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.18□□□□□ -1.9
DUSP9Q99956 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
DUSP9Q99956 RNU6-728P-201ENST00000365375 104 ntBASIC3.17□□□□□ -1.9
DUSP9Q99956 RNU6-449P-201ENST00000383914 107 ntBASIC3.17□□□□□ -1.9
DUSP9Q99956 Y_RNA.398-201ENST00000383952 99 ntBASIC3.17□□□□□ -1.9
DUSP9Q99956 RNU6-239P-201ENST00000390990 99 ntBASIC3.17□□□□□ -1.9
DUSP9Q99956 RN7SKP101-201ENST00000411376 320 ntBASIC3.17□□□□□ -1.9
DUSP9Q99956 HMGN2P35-201ENST00000412164 270 ntBASIC3.17□□□□□ -1.9
DUSP9Q99956 AC011604.1-201ENST00000545978 196 ntBASIC3.17□□□□□ -1.9
DUSP9Q99956 MIR3126-201ENST00000577443 74 ntBASIC3.17□□□□□ -1.9
DUSP9Q99956 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
DUSP9Q99956 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DUSP9Q99956 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DUSP9Q99956 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
DUSP9Q99956 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
DUSP9Q99956 SNORA80A-201ENST00000363922 136 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 Y_RNA.203-201ENST00000364106 102 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 RNA5SP493-201ENST00000364115 91 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 MIR562-201ENST00000384894 95 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.16□□□□□ -1.9
DUSP9Q99956 CST2P1-201ENST00000425770 87 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 AL121914.1-201ENST00000450188 156 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 AL109933.2-201ENST00000452651 260 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 YWHAEP4-201ENST00000505390 198 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 AC107027.2-201ENST00000512197 115 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 RNU6-1096P-201ENST00000517089 102 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 AC024995.1-201ENST00000523014 93 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 AC107016.2-201ENST00000547968 190 ntBASIC3.16□□□□□ -1.9
DUSP9Q99956 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.16□□□□□ -1.9
DUSP9Q99956 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
DUSP9Q99956 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
DUSP9Q99956 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.16□□□□□ -1.9
DUSP9Q99956 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
DUSP9Q99956 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
DUSP9Q99956 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
DUSP9Q99956 RNU6-23P-201ENST00000363283 107 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 RNU1-91P-201ENST00000364746 163 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 SNORD116-18-201ENST00000383961 92 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 MIR512-1-201ENST00000384913 84 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 MT-TT-201ENST00000387460 66 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 RNA5SP323-201ENST00000391094 133 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 RNA5SP467-201ENST00000391274 118 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 AL117342.1-201ENST00000404861 406 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 AL139132.1-201ENST00000431587 344 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 RNA5SP76-201ENST00000516277 87 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 RPPH1-2P-201ENST00000516688 293 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 RNU7-128P-201ENST00000517247 62 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 MTND5P41-201ENST00000517498 206 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DUSP9Q99956 AC100821.1-201ENST00000523153 2479 ntBASIC3.15□□□□□ -1.91
DUSP9Q99956 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.15□□□□□ -1.91
DUSP9Q99956 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
DUSP9Q99956 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms