Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MIR4752-201ENST00000579672 72 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 MIR4742-201ENST00000581069 85 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 AC010525.2-201ENST00000590920 195 ntBASIC-0.9□□□□□ -2.55
COL12A1Q99715 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.91□□□□□ -2.55
COL12A1Q99715 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.91□□□□□ -2.55
COL12A1Q99715 RNU6-31P-201ENST00000384388 108 ntBASIC-0.91□□□□□ -2.55
COL12A1Q99715 RNU4-88P-201ENST00000411220 86 ntBASIC-0.91□□□□□ -2.55
COL12A1Q99715 BTF3P15-201ENST00000455606 336 ntBASIC-0.91□□□□□ -2.55
COL12A1Q99715 RNU7-73P-201ENST00000458743 63 ntBASIC-0.91□□□□□ -2.55
COL12A1Q99715 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.91□□□□□ -2.55
COL12A1Q99715 AC245505.1-201ENST00000556398 224 ntBASIC-0.91□□□□□ -2.55
COL12A1Q99715 AC008250.2-201ENST00000615261 205 ntBASIC-0.91□□□□□ -2.55
COL12A1Q99715 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.91□□□□□ -2.55
COL12A1Q99715 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.91□□□□□ -2.56
COL12A1Q99715 RPS27AP14-201ENST00000422868 454 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 AC010153.1-201ENST00000432862 727 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 AC007000.2-201ENST00000442564 487 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 AC104629.2-201ENST00000468627 598 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 AC104576.1-201ENST00000524225 88 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 AL162424.1-201ENST00000602325 221 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 AC034229.4-201ENST00000607861 441 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 AC122133.1-201ENST00000613964 233 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 AP003400.6-201ENST00000624698 740 ntBASIC-0.91□□□□□ -2.56
COL12A1Q99715 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 MIR802-201ENST00000390235 94 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.92□□□□□ -2.56
COL12A1Q99715 SUMO1P3-201ENST00000439961 304 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC007684.1-201ENST00000609671 477 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC010205.1-201ENST00000616668 449 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC091304.10-201ENST00000641554 121 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC092447.3-201ENST00000426027 686 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.92□□□□□ -2.56
COL12A1Q99715 RNU6-63P-201ENST00000516690 95 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 RNU6-323P-201ENST00000521915 107 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC090617.3-201ENST00000573670 475 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AL450472.1-202ENST00000637286 180 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 SNORD113-7-201ENST00000363762 77 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 RNU6-364P-201ENST00000384387 107 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
COL12A1Q99715 MTCO3P40-201ENST00000392516 676 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.92□□□□□ -2.56
COL12A1Q99715 snoU13.14-201ENST00000459372 104 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC093519.1-201ENST00000566109 298 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 AC005771.1-201ENST00000585581 349 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 SNORD115-40-201ENST00000606510 82 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 RNU1-29P-201ENST00000606574 126 ntBASIC-0.92□□□□□ -2.56
COL12A1Q99715 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.93□□□□□ -2.56
COL12A1Q99715 SNORA2.2-201ENST00000365473 135 ntBASIC-0.93□□□□□ -2.56
COL12A1Q99715 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.93□□□□□ -2.56
COL12A1Q99715 AC091163.3-201ENST00000518269 1144 ntBASIC-0.93□□□□□ -2.56
COL12A1Q99715 AL359547.2-201ENST00000615810 418 ntBASIC-0.93□□□□□ -2.56
COL12A1Q99715 RNA5SP467-201ENST00000391274 118 ntBASIC-0.93□□□□□ -2.56
COL12A1Q99715 MTCO1P17-201ENST00000411522 491 ntBASIC-0.93□□□□□ -2.56
COL12A1Q99715 AC098614.3-201ENST00000438957 440 ntBASIC-0.93□□□□□ -2.56
COL12A1Q99715 MIR4778-201ENST00000577635 80 ntBASIC-0.93□□□□□ -2.56
COL12A1Q99715 snoZ40.1-201ENST00000364540 72 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 SNORD115-26-201ENST00000365067 82 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 AL354692.1-201ENST00000423044 315 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.94□□□□□ -2.56
COL12A1Q99715 AL392103.1-201ENST00000447000 198 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 USP9YP12-201ENST00000450481 570 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 AC046134.1-201ENST00000514454 666 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 AC024995.1-201ENST00000523014 93 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 AC121247.2-201ENST00000604776 136 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 MIR8054-201ENST00000620877 86 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 SNORA67.2-201ENST00000384300 149 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 MTCYBP8-201ENST00000422855 651 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 MTND1P32-201ENST00000433043 938 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 RNU6-135P-201ENST00000516769 101 ntBASIC-0.94□□□□□ -2.56
COL12A1Q99715 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.94□□□□□ -2.56
COL12A1Q99715 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 MTCO2P33-201ENST00000402100 465 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 HMGN2P32-201ENST00000444648 269 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 AC010587.1-201ENST00000505809 469 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 LRRC6P1-201ENST00000532188 885 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.95□□□□□ -2.56
COL12A1Q99715 RNU6-90P-201ENST00000606352 106 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.95□□□□□ -2.56
COL12A1Q99715 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 SNORD114-29-201ENST00000364819 70 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 SNORD31B-201ENST00000364977 69 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 RNU6-54P-201ENST00000365563 107 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 RNU6-484P-201ENST00000384016 107 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 MIR516B1-201ENST00000385211 90 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 RNU2-8P-201ENST00000410727 190 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 AL139824.2-201ENST00000458731 1095 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 SERF1AP1-201ENST00000514575 187 ntBASIC-0.95□□□□□ -2.56
COL12A1Q99715 SNORA25.17-201ENST00000517184 124 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms