Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 AC073413.2-201ENST00000604332 360 ntBASIC1.69□□□□□ -2.14
GFI1Q99684 AC018630.2-201ENST00000534866 2403 ntBASIC1.69□□□□□ -2.14
GFI1Q99684 Y_RNA.124-201ENST00000363339 93 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 SNORD113-8-201ENST00000363497 74 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 SNORA5B-201ENST00000363786 132 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 Y_RNA.329-201ENST00000365209 107 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 MIR606-201ENST00000384851 96 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 RNU6-1248P-201ENST00000391096 64 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 NDUFB4P4-201ENST00000404822 243 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 OOSP1P1-201ENST00000423265 274 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 HSPE1P9-201ENST00000440046 311 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.68□□□□□ -2.14
GFI1Q99684 TRBV12-1-201ENST00000479785 344 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 HMGB3P17-201ENST00000504195 649 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.68□□□□□ -2.14
GFI1Q99684 RNY3P15-201ENST00000516297 97 ntBASIC1.68□□□□□ -2.14
GFI1Q99684 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.68□□□□□ -2.14
GFI1Q99684 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.68□□□□□ -2.14
GFI1Q99684 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.68□□□□□ -2.14
GFI1Q99684 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.67□□□□□ -2.14
GFI1Q99684 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GFI1Q99684 RNU4-90P-201ENST00000362773 141 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 Y_RNA.153-201ENST00000363615 91 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 Y_RNA.214-201ENST00000364201 112 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 SNORA67.3-201ENST00000384366 140 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 MIR520G-201ENST00000385064 90 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 RNU4-30P-201ENST00000410245 143 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 AL135786.1-201ENST00000415892 214 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 POLR2KP2-201ENST00000438155 177 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 RPL23AP42-201ENST00000471152 471 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 MRPS35P2-201ENST00000508242 191 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 Y_RNA.720-201ENST00000517166 92 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 MIR6079-201ENST00000635807 62 ntBASIC1.67□□□□□ -2.14
GFI1Q99684 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
GFI1Q99684 Y_RNA.19-201ENST00000362462 99 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 Y_RNA.145-201ENST00000363527 102 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 RNU6-414P-201ENST00000363705 104 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 Y_RNA.333-201ENST00000365274 102 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 RNU6-117P-201ENST00000365415 107 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 SNORA64-201ENST00000384674 134 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
GFI1Q99684 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.66□□□□□ -2.14
GFI1Q99684 AC245047.3-201ENST00000429428 127 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 snoU13.27-201ENST00000459278 104 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.66□□□□□ -2.14
GFI1Q99684 AC025465.3-201ENST00000510570 311 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 RNU6-1337P-201ENST00000516525 95 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 RNA5SP437-201ENST00000517249 129 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.66□□□□□ -2.14
GFI1Q99684 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.66□□□□□ -2.14
GFI1Q99684 IGHVIII-44-202ENST00000636235 289 ntBASIC1.66□□□□□ -2.14
GFI1Q99684 AL356292.1-201ENST00000283110 373 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 SNORD81.1-201ENST00000363064 77 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 RNA5SP109-201ENST00000391010 116 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 RPL21P1-201ENST00000399532 476 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 Y_RNA.602-201ENST00000410535 92 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 RN7SKP200-201ENST00000410564 320 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 RNU4-53P-201ENST00000410828 140 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.65□□□□□ -2.15
GFI1Q99684 ELOCP20-201ENST00000422460 345 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 AL731563.1-201ENST00000442202 214 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 MTND4LP30-201ENST00000454092 297 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 AC010655.3-201ENST00000478818 450 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 RNU6-966P-201ENST00000516479 104 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 RNU6-341P-201ENST00000516973 96 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 MIR4709-201ENST00000577272 72 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 AL162424.1-201ENST00000602325 221 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 AC022217.4-201ENST00000604389 163 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
GFI1Q99684 AL359851.1-201ENST00000569460 4997 ntBASIC1.65□□□□□ -2.15
GFI1Q99684 RNU4-13P-201ENST00000364019 141 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.64□□□□□ -2.15
GFI1Q99684 Y_RNA.383-201ENST00000383855 97 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 Y_RNA.581-201ENST00000391017 97 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 AC113618.1-201ENST00000416747 285 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 AL162725.1-201ENST00000435405 301 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 RPS27P1-201ENST00000450552 247 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 LINC01399-202ENST00000458450 244 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 RNU6-496P-201ENST00000516145 99 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 MIR3162-201ENST00000581818 82 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 AC037487.3-201ENST00000606668 112 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 MIR8074-201ENST00000615081 81 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 MIR8054-201ENST00000620877 86 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
GFI1Q99684 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.64□□□□□ -2.15
GFI1Q99684 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
GFI1Q99684 AL136360.1-201ENST00000503377 1900 ntBASIC1.64□□□□□ -2.15
GFI1Q99684 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
GFI1Q99684 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.63□□□□□ -2.15
GFI1Q99684 Y_RNA.222-201ENST00000364264 102 ntBASIC1.63□□□□□ -2.15
GFI1Q99684 RNU6-440P-201ENST00000390882 105 ntBASIC1.63□□□□□ -2.15
GFI1Q99684 RNU6-855P-201ENST00000410395 104 ntBASIC1.63□□□□□ -2.15
GFI1Q99684 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.63□□□□□ -2.15
GFI1Q99684 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.63□□□□□ -2.15
GFI1Q99684 AL445646.1-201ENST00000431784 216 ntBASIC1.63□□□□□ -2.15
GFI1Q99684 AC091021.1-201ENST00000468051 388 ntBASIC1.63□□□□□ -2.15
GFI1Q99684 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.63□□□□□ -2.15
GFI1Q99684 RNU7-28P-201ENST00000516759 62 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms