Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNU6-505P-201ENST00000384427 107 ntBASIC1.78□□□□□ -2.12
NR1H4Q96RI1 RNU6-21P-201ENST00000384710 107 ntBASIC1.78□□□□□ -2.12
NR1H4Q96RI1 JTBP1-201ENST00000441314 247 ntBASIC1.78□□□□□ -2.12
NR1H4Q96RI1 MIR3171-201ENST00000584270 74 ntBASIC1.78□□□□□ -2.12
NR1H4Q96RI1 AL356055.1-201ENST00000602528 446 ntBASIC1.78□□□□□ -2.12
NR1H4Q96RI1 MIR6079-201ENST00000635807 62 ntBASIC1.78□□□□□ -2.12
NR1H4Q96RI1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
NR1H4Q96RI1 MIR449A-201ENST00000362113 91 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 SNORA4.2-201ENST00000365313 147 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 SNORD63-201ENST00000384262 68 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 AC024067.1-201ENST00000426199 223 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 HMGN2P23-201ENST00000456759 269 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 snoU13.9-201ENST00000458927 103 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 RPL23AP94-201ENST00000512518 302 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
NR1H4Q96RI1 MIR4423-201ENST00000580922 80 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 AC022217.4-201ENST00000604389 163 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.77□□□□□ -2.13
NR1H4Q96RI1 AC100821.1-201ENST00000523153 2479 ntBASIC1.77□□□□□ -2.13
NR1H4Q96RI1 MIR520G-201ENST00000385064 90 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 RNU6-823P-201ENST00000391042 103 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 RNU6-710P-201ENST00000410424 105 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 AL139156.1-201ENST00000412785 841 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.76□□□□□ -2.13
NR1H4Q96RI1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.76□□□□□ -2.13
NR1H4Q96RI1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.76□□□□□ -2.13
NR1H4Q96RI1 AL606517.2-201ENST00000442855 241 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 HSPE1P13-201ENST00000451143 297 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.715-201ENST00000517082 110 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 IGKV3-31-201ENST00000523109 329 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.76□□□□□ -2.13
NR1H4Q96RI1 MIR4513-201ENST00000581077 86 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 AL162424.1-201ENST00000602325 221 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 AC016925.2-201ENST00000605108 242 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 SNORA28-201ENST00000606769 126 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 MIR8054-201ENST00000620877 86 ntBASIC1.76□□□□□ -2.13
NR1H4Q96RI1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.158-201ENST00000363651 101 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 RNU6-450P-201ENST00000364654 107 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 RNU6-937P-201ENST00000384325 106 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 SNORA67.3-201ENST00000384366 140 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 MIR1252-201ENST00000408861 65 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 RNU2-20P-201ENST00000410425 191 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 AC005534.2-201ENST00000431047 433 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 RPS27P1-201ENST00000450552 247 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 RNU2-56P-201ENST00000516826 190 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 CBX3P4-201ENST00000538909 354 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 AC020661.2-201ENST00000560114 134 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 MIR4435-1-201ENST00000582552 80 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.75□□□□□ -2.13
NR1H4Q96RI1 AL929325.1-201ENST00000603096 117 ntBASIC1.75□□□□□ -2.13
NR1H4Q96RI1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.75□□□□□ -2.13
NR1H4Q96RI1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NR1H4Q96RI1 MIR424-201ENST00000362227 98 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 RNU4-82P-201ENST00000362443 140 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 RNU4-13P-201ENST00000364019 141 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 RNU4-76P-201ENST00000364509 141 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.380-201ENST00000365663 111 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.74□□□□□ -2.13
NR1H4Q96RI1 RNU6-440P-201ENST00000390882 105 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.645-201ENST00000391229 102 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 AL034345.1-201ENST00000407768 123 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 RNU6-436P-201ENST00000516171 114 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 RNU6-397P-201ENST00000516226 104 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.74□□□□□ -2.13
NR1H4Q96RI1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.74□□□□□ -2.13
NR1H4Q96RI1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.73□□□□□ -2.13
NR1H4Q96RI1 RNU6-117P-201ENST00000365415 107 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 RN7SKP192-201ENST00000411291 327 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 RNA5SP508-201ENST00000411327 119 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 OOSP1P1-201ENST00000423265 274 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 AC091021.1-201ENST00000468051 388 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 SEPT14P8-201ENST00000508026 178 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 SNORA40.15-201ENST00000516884 107 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 RNU6-341P-201ENST00000516973 96 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 AC104695.3-201ENST00000604052 296 ntBASIC1.73□□□□□ -2.13
NR1H4Q96RI1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NR1H4Q96RI1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.73□□□□□ -2.13
NR1H4Q96RI1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NR1H4Q96RI1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.152-201ENST00000363578 100 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.216-201ENST00000364205 93 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 RNU6-1227P-201ENST00000383981 107 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.455-201ENST00000384230 98 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 237.2 ms