Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 ZNF962P-201ENST00000443465 3140 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNA5SP295-201ENST00000362655 121 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNU1-22P-201ENST00000363334 158 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNU6-975P-201ENST00000384296 105 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNU1-89P-201ENST00000384592 164 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNA5SP252-201ENST00000391131 119 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNA5SP247-201ENST00000411181 105 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNU6-57P-201ENST00000411348 103 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 SNRPGP13-201ENST00000442212 177 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNU2-27P-201ENST00000516185 142 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 RNU7-6P-201ENST00000516845 62 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 AC006064.5-201ENST00000541782 248 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 AC025627.2-201ENST00000576220 160 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 MIR4276-201ENST00000584832 70 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 MIR432-201ENST00000606207 94 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 MIR7112-201ENST00000616126 65 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 AC087741.2-201ENST00000619415 172 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 AC007546.2-201ENST00000623996 360 ntBASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CNTNAP3BQ96NU0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 RNA5SP322-201ENST00000363617 119 ntBASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 Y_RNA.360-201ENST00000365512 102 ntBASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 Y_RNA.507-201ENST00000384500 99 ntBASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 Y_RNA.565-201ENST00000384719 101 ntBASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 AL138878.1-201ENST00000405131 347 ntBASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 RNU7-172P-201ENST00000517125 64 ntBASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 AC091304.10-201ENST00000641554 121 ntBASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.68□□□□□ -1.82
CNTNAP3BQ96NU0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 Y_RNA.4-201ENST00000362333 112 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 Y_RNA.96-201ENST00000363092 109 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 RNU6-1229P-201ENST00000364295 107 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 MIR1183-201ENST00000408856 89 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 Y_RNA.607-201ENST00000410597 98 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 SNORA74C-2-201ENST00000411179 201 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 RPL32P35-201ENST00000415214 394 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 SNRPGP3-201ENST00000469405 227 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 RNA5SP112-201ENST00000515937 99 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 RNU6-1006P-201ENST00000516998 103 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 MIR3618-201ENST00000580330 88 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 MIR4305-201ENST00000583252 102 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 MIR4753-201ENST00000585119 83 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 AC008507.4-201ENST00000585464 127 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 AL033523.1-201ENST00000605153 153 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 AC110741.2-201ENST00000605278 268 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 MIR7843-201ENST00000622274 79 ntBASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CNTNAP3BQ96NU0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 RNU6-363P-201ENST00000362895 105 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 SNORA2.2-201ENST00000365473 135 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 Y_RNA.611-201ENST00000410682 108 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 AL513477.1-202ENST00000417061 214 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 RPS27P22-201ENST00000478056 241 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 AC006445.1-201ENST00000491925 405 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 RNU2-35P-201ENST00000516446 142 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 AC103810.1-201ENST00000579873 453 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 MIR4524B-201ENST00000581569 115 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 uc_338.32-201ENST00000615087 172 ntBASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.66□□□□□ -1.82
CNTNAP3BQ96NU0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CNTNAP3BQ96NU0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.65□□□□□ -1.82
CNTNAP3BQ96NU0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CNTNAP3BQ96NU0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CNTNAP3BQ96NU0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CNTNAP3BQ96NU0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.316-201ENST00000365118 111 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.410-201ENST00000383992 113 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 SNORA54-201ENST00000384281 123 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 Z98742.2-201ENST00000431564 187 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 AC016717.1-201ENST00000448918 286 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 RPL29P14-201ENST00000495837 428 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 Y_RNA.659-201ENST00000515994 113 ntBASIC3.65□□□□□ -1.83
CNTNAP3BQ96NU0 RNA5SP341-201ENST00000516261 117 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms