Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 RNU6-586P-201ENST00000517265 104 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 HSPE1P18-201ENST00000517602 280 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 AP005660.1-201ENST00000522972 293 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 MIR5006-201ENST00000583027 110 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 MIR4658-201ENST00000584344 65 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 AC025754.2-201ENST00000606491 432 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 TCL6_2.1-201ENST00000615162 119 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 AC005562.2-201ENST00000618264 111 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 AC009831.4-201ENST00000620744 325 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 AL365265.1-201ENST00000621045 234 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 U6.106-201ENST00000636360 105 ntBASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VCPIP1Q96JH7 Y_RNA.8-201ENST00000362353 102 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 AL591806.2-201ENST00000433122 173 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 AC091021.1-201ENST00000468051 388 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 HMGB3P3-201ENST00000510526 400 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 RNU6-1219P-201ENST00000516143 112 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 IGLV3-17-201ENST00000519099 244 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 DEFB131C-201ENST00000528817 165 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 MRPS18CP4-201ENST00000535821 231 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 AC015712.3-201ENST00000559380 164 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 AC104465.1-201ENST00000611365 139 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 MIR5739-201ENST00000619803 80 ntBASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VCPIP1Q96JH7 AC131280.1-202ENST00000624067 4211 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 MIRLET7G-201ENST00000362280 84 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 Y_RNA.170-201ENST00000363746 110 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 RNU6-454P-201ENST00000364292 107 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 Y_RNA.240-201ENST00000364469 95 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 Y_RNA.304-201ENST00000365011 112 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 RNU6-1264P-201ENST00000383891 107 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 RNU6-804P-201ENST00000384286 107 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 MIR95-201ENST00000385072 81 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 MIR764-201ENST00000390811 85 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 SNORA48.3-201ENST00000391081 134 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 U3.40-201ENST00000408706 208 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 BTF3P11-201ENST00000426582 477 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 AL356320.1-201ENST00000429616 163 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 AL161788.1-201ENST00000441805 169 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 RNU6-436P-201ENST00000516171 114 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 RNU2-44P-201ENST00000516795 194 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 RNU2-12P-201ENST00000517216 168 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 SNORD11B-201ENST00000607707 90 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 AL008718.3-201ENST00000610217 321 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VCPIP1Q96JH7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 RNU6-1272P-201ENST00000362776 107 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 SNORA6-201ENST00000384033 151 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 RNU6-1248P-201ENST00000391096 64 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 MTCO2P33-201ENST00000402100 465 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 CKS1BP2-201ENST00000497342 240 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 MIR449C-201ENST00000516047 92 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 RNU6-346P-201ENST00000516288 111 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 RNA5SP200-201ENST00000516360 103 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 RNU6-344P-201ENST00000516635 111 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VCPIP1Q96JH7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 RNU6-653P-201ENST00000363074 106 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 SNORD32B-201ENST00000364460 84 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 MIR29B2-201ENST00000385055 81 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 AL357139.1-201ENST00000407792 426 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 RNU6-965P-201ENST00000516721 96 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 MTND5P41-201ENST00000517498 206 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 MIR3144-201ENST00000579460 79 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 AL355297.2-201ENST00000604792 129 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 AC068205.3-201ENST00000636385 468 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 AC005336.3-201ENST00000623833 2679 ntBASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
VCPIP1Q96JH7 SNORA80E-201ENST00000384744 137 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 RNU6-482P-201ENST00000391068 107 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 RNA5SP504-201ENST00000410676 117 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 AL606753.1-201ENST00000427435 87 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 Y_RNA.637-201ENST00000459424 114 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 PRELID2P1-201ENST00000552837 301 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 MIR1273D-201ENST00000577266 86 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 MIR5692C2-201ENST00000577959 77 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms