Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU6-271P-201ENST00000363858 105 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 RNU6-514P-201ENST00000384208 107 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 MIR597-201ENST00000384968 97 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 SNORA48.3-201ENST00000391081 134 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 AL135786.1-201ENST00000415892 214 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 AC024067.1-201ENST00000426199 223 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 AL356320.1-201ENST00000429616 163 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 YWHAEP4-201ENST00000505390 198 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 RNA5SP20-201ENST00000515976 84 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 AC006435.5-201ENST00000624486 112 ntBASIC2.43□□□□□ -2.02
CDK5RAP3Q96JB5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 Y_RNA.287-201ENST00000364853 94 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 Y_RNA.361-201ENST00000365515 120 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 Y_RNA.401-201ENST00000383965 117 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 RNU2-61P-201ENST00000411069 191 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 AL356379.1-201ENST00000414105 126 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 MTCO1P5-201ENST00000433573 344 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 RPL23AP7-203ENST00000449021 469 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 AL137100.2-201ENST00000555786 315 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 AC012433.1-201ENST00000588916 398 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 MIR338-201ENST00000636369 67 ntBASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDK5RAP3Q96JB5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 MIR335-201ENST00000362173 94 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 Y_RNA.14-201ENST00000362415 103 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 Y_RNA.518-201ENST00000384552 113 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 RNA5SP465-201ENST00000391195 109 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 MIR1283-2-201ENST00000408621 87 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 MTND4LP30-201ENST00000454092 297 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 SNORA59A-201ENST00000459326 152 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 AC010409.1-201ENST00000487382 476 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 RPL21P9-201ENST00000556149 474 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 MIR4438-201ENST00000585271 93 ntBASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.41□□□□□ -2.02
CDK5RAP3Q96JB5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.4□□□□□ -2.02
CDK5RAP3Q96JB5 CENPCP1-201ENST00000533085 2578 ntBASIC2.4□□□□□ -2.02
CDK5RAP3Q96JB5 SNORD114-7-201ENST00000362520 77 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-862P-201ENST00000362804 105 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 AL512604.1-201ENST00000404812 257 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 HMGN2P3-201ENST00000433603 273 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 HMGN2P5-201ENST00000436882 273 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 RPL39P38-201ENST00000467018 153 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 RPS26P55-201ENST00000471178 356 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 AC079804.2-201ENST00000490376 200 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 AL512605.2-201ENST00000592972 256 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 AL353149.1-201ENST00000610667 244 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 AL590808.1-201ENST00000618696 141 ntBASIC2.4□□□□□ -2.03
CDK5RAP3Q96JB5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.307-201ENST00000365022 117 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.350-201ENST00000365409 98 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-1248P-201ENST00000391096 64 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 RNA5SP467-201ENST00000391274 118 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 AL117342.1-201ENST00000404861 406 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-855P-201ENST00000410395 104 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-710P-201ENST00000410424 105 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-1186P-201ENST00000410429 97 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 RNU2-40P-201ENST00000410833 196 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 AC091959.1-201ENST00000495857 238 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-191P-201ENST00000516295 94 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 AC005786.1-201ENST00000588553 154 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 AC064859.1-201ENST00000624741 174 ntBASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CDK5RAP3Q96JB5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 RNU1-96P-201ENST00000364163 162 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-301P-201ENST00000384277 107 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.477-201ENST00000384352 108 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 RNA5SP425-201ENST00000410336 112 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 AC090255.1-201ENST00000495779 349 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 RNU6-1337P-201ENST00000516525 95 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 U6.73-201ENST00000619194 103 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 AC008555.8-201ENST00000623602 2168 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 AC022513.1-201ENST00000624512 117 ntBASIC2.38□□□□□ -2.03
CDK5RAP3Q96JB5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 AL356292.1-201ENST00000283110 373 ntBASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 RNU4-52P-201ENST00000384209 138 ntBASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.562-201ENST00000384695 113 ntBASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 Y_RNA.618-201ENST00000410949 107 ntBASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 Z98742.3-201ENST00000418637 326 ntBASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 AC099677.2-201ENST00000436385 175 ntBASIC2.37□□□□□ -2.03
CDK5RAP3Q96JB5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms