| TMEM41A | Q96HV5 | 5S_rRNA.13-201 | ENST00000622298 | 123 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.07 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | FGF7-206 | ENST00000614567 | 3936 nt | APPRIS P1 TSL 1 (best) BASIC | 2.07 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | SNORD113-8-201 | ENST00000363497 | 74 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-770P-201 | ENST00000363929 | 105 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | Y_RNA.276-201 | ENST00000364732 | 109 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-950P-201 | ENST00000384651 | 107 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNA5SP109-201 | ENST00000391010 | 116 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | Y_RNA.602-201 | ENST00000410535 | 92 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | COX6CP10-201 | ENST00000416832 | 224 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | Z98742.3-201 | ENST00000418637 | 326 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | HMGB3P17-201 | ENST00000504195 | 649 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-1143P-201 | ENST00000516125 | 104 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC026523.1-201 | ENST00000617221 | 490 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | ZNF720P1-201 | ENST00000562403 | 1939 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC007370.2-201 | ENST00000506899 | 2694 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC018630.2-201 | ENST00000534866 | 2403 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | GABRA2-209 | ENST00000510861 | 3411 nt | APPRIS P1 TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AL356292.1-201 | ENST00000283110 | 373 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNA5SP37-201 | ENST00000365420 | 130 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-1160P-201 | ENST00000384546 | 104 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | TRAJ23-201 | ENST00000390514 | 63 nt | APPRIS P1 BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-710P-201 | ENST00000410424 | 105 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC113618.1-201 | ENST00000416747 | 285 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AL162400.2-201 | ENST00000427547 | 157 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | POLR2KP2-201 | ENST00000438155 | 177 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | HSPE1P13-201 | ENST00000451143 | 297 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC093893.1-201 | ENST00000505781 | 510 nt | TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MRPS35P2-201 | ENST00000508242 | 191 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-1337P-201 | ENST00000516525 | 95 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC100807.1-201 | ENST00000517640 | 552 nt | TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC084882.1-201 | ENST00000561254 | 555 nt | TSL 4 BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIR1273D-201 | ENST00000577266 | 86 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AL096840.1-201 | ENST00000603287 | 93 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AL359851.1-201 | ENST00000569460 | 4997 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | Y_RNA.19-201 | ENST00000362462 | 99 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | Y_RNA.153-201 | ENST00000363615 | 91 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-414P-201 | ENST00000363705 | 104 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | LINC00583-201 | ENST00000381010 | 387 nt | TSL 2 BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | SNORA70B-201 | ENST00000384210 | 135 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIR606-201 | ENST00000384851 | 96 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIR562-201 | ENST00000384894 | 95 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIR221-201 | ENST00000385135 | 110 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-360P-201 | ENST00000390944 | 104 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | SNORD115-46-201 | ENST00000390982 | 71 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RN7SKP223-201 | ENST00000410582 | 62 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU2-61P-201 | ENST00000411069 | 191 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | ELOCP20-201 | ENST00000422460 | 345 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC245047.3-201 | ENST00000429428 | 127 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | FTH1P12-201 | ENST00000432137 | 551 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNA5SP200-201 | ENST00000516360 | 103 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIR3945-201 | ENST00000581853 | 98 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIR6132-201 | ENST00000622083 | 109 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIR6079-201 | ENST00000635807 | 62 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | CGGBP1-202 | ENST00000398392 | 5298 nt | APPRIS P1 BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | OSTN-201 | ENST00000339051 | 402 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | Y_RNA.214-201 | ENST00000364201 | 112 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-136P-201 | ENST00000384663 | 107 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RPL21P1-201 | ENST00000399532 | 476 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6ATAC37P-201 | ENST00000408328 | 131 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC073323.1-201 | ENST00000419832 | 451 nt | TSL 2 BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | OOSP1P1-201 | ENST00000423265 | 274 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | snoU13.27-201 | ENST00000459278 | 104 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC010655.3-201 | ENST00000478818 | 450 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | RNU6-63P-201 | ENST00000516690 | 95 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIR4709-201 | ENST00000577272 | 72 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC022217.4-201 | ENST00000604389 | 163 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC009831.4-201 | ENST00000620744 | 325 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIR6873-201 | ENST00000622788 | 63 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | MIER3-204 | ENST00000381226 | 5210 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| TMEM41A | Q96HV5 | AC092881.1-201 | ENST00000638218 | 2733 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | RNU6-661P-201 | ENST00000362409 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | RNU4-90P-201 | ENST00000362773 | 141 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | SNORD81.1-201 | ENST00000363064 | 77 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | RNU4-13P-201 | ENST00000364019 | 141 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | RNU6-117P-201 | ENST00000365415 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | Y_RNA.383-201 | ENST00000383855 | 97 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | SNORA48.3-201 | ENST00000391081 | 134 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | RNU2-40P-201 | ENST00000410833 | 196 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | AL358234.1-201 | ENST00000421132 | 273 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | AL606517.2-201 | ENST00000442855 | 241 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | RNU7-34P-201 | ENST00000459394 | 64 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | SNORA44.1-201 | ENST00000517031 | 108 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | Y_RNA.720-201 | ENST00000517166 | 92 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | AC087518.1-201 | ENST00000524098 | 187 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | AP001363.1-201 | ENST00000544108 | 264 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | MIR4448-201 | ENST00000584360 | 86 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | AC002984.1-201 | ENST00000591692 | 448 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | DEFB117-201 | ENST00000602356 | 141 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | HAS2-201 | ENST00000303924 | 4190 nt | APPRIS P1 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | SLC25A46-204 | ENST00000504098 | 2345 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | U8.2-201 | ENST00000363156 | 134 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | Y_RNA.286-201 | ENST00000364813 | 102 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | SNORA4.2-201 | ENST00000365313 | 147 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | MIR520G-201 | ENST00000385064 | 90 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | RNU6-855P-201 | ENST00000410395 | 104 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | RN7SKP200-201 | ENST00000410564 | 320 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | GHRL-208 | ENST00000439975 | 326 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | RPS27P1-201 | ENST00000450552 | 247 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| TMEM41A | Q96HV5 | LINC01399-202 | ENST00000458450 | 244 nt | BASIC | 2.01 | □□□□□ -2.09 | | |