Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.26-201ENST00000362539 101 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.105-201ENST00000363182 111 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.143-201ENST00000363520 106 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.183-201ENST00000363882 113 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.439-201ENST00000384119 94 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 RAB28P5-201ENST00000427490 651 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 RNU6-625P-201ENST00000459412 107 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 MTATP8P1-201ENST00000467115 207 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 MIR4423-201ENST00000580922 80 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 MIR3945-201ENST00000581853 98 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 MIR4422-201ENST00000581938 83 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 AC013412.1-201ENST00000610687 192 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 AC004467.1-201ENST00000615678 330 ntBASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
PDLIM5Q96HC4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
PDLIM5Q96HC4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.133-201ENST00000363428 110 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-770P-201ENST00000363929 105 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.210-201ENST00000364161 110 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.276-201ENST00000364732 109 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-806P-201ENST00000365147 105 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-439P-201ENST00000384188 106 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.459-201ENST00000384251 102 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.462-201ENST00000384268 102 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-1105P-201ENST00000384774 107 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 SNORD115-46-201ENST00000390982 71 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-1109P-201ENST00000391187 107 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-121P-201ENST00000410525 99 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-221P-201ENST00000459541 99 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-397P-201ENST00000516226 104 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RNU6-966P-201ENST00000516479 104 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 AL117187.1-201ENST00000555482 181 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 MIR3674-201ENST00000636576 68 ntBASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
PDLIM5Q96HC4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 RNU6-338P-201ENST00000383888 105 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 SNORD63-201ENST00000384262 68 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 RNU6-937P-201ENST00000384325 106 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 RNU6-1235P-201ENST00000384559 107 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 RNU6-296P-201ENST00000384608 107 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 AC005002.2-201ENST00000438228 269 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 HSPE1P9-201ENST00000440046 311 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 RNU6-498P-201ENST00000459468 107 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 MRPS35P2-201ENST00000508242 191 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 AC011406.1-201ENST00000512440 370 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 RNU6-107P-201ENST00000516643 102 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.713-201ENST00000517013 96 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 AC025647.1-201ENST00000517879 253 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 MIR6845-201ENST00000613182 61 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 snoZ196.1-201ENST00000625269 89 ntBASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
PDLIM5Q96HC4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.64-201ENST00000362845 102 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.152-201ENST00000363578 100 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.222-201ENST00000364264 102 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.230-201ENST00000364348 109 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 SNORA72.2-201ENST00000365028 127 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 RNU6-1310P-201ENST00000384153 107 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 MIR568-201ENST00000385036 95 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 RNA5SP475-201ENST00000410568 110 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 AC016909.1-201ENST00000415916 166 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 AC060773.1-201ENST00000421698 310 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 CST2P1-201ENST00000425770 87 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 TOMM22P2-201ENST00000430735 237 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 LINC01399-202ENST00000458450 244 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 snoU13.15-201ENST00000459407 104 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 AC098869.1-201ENST00000481627 292 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 AC022441.3-201ENST00000605737 136 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 AL353149.1-201ENST00000610667 244 ntBASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PDLIM5Q96HC4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.19-201ENST00000362462 99 ntBASIC1.62□□□□□ -2.15
PDLIM5Q96HC4 Y_RNA.243-201ENST00000364481 109 ntBASIC1.62□□□□□ -2.15
PDLIM5Q96HC4 MIR515-2-201ENST00000384883 83 ntBASIC1.62□□□□□ -2.15
PDLIM5Q96HC4 MIR515-1-201ENST00000384884 83 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms