Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ECHDC3Q96DC8 MIR410-201ENST00000362222 80 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 RNU6-117P-201ENST00000365415 107 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 RNU6-1264P-201ENST00000383891 107 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 MIR329-1-201ENST00000385028 80 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 SNORA75.2-201ENST00000391138 150 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 SNORA75.3-201ENST00000391231 150 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 RPS3AP1-201ENST00000413190 320 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 USMG5P1-201ENST00000425964 177 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 RPL39P39-201ENST00000455840 151 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 AC018710.1-201ENST00000506509 158 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 RNA5SP20-201ENST00000515976 84 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 RNU7-12P-201ENST00000516030 62 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 SNORA70.12-201ENST00000516084 153 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 RNA5SP255-201ENST00000516370 107 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 RNU2-56P-201ENST00000516826 190 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 AL358944.1-201ENST00000528537 144 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 AC125232.2-201ENST00000592457 143 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 AC005828.6-201ENST00000606610 232 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ECHDC3Q96DC8 RNU6-306P-201ENST00000384617 107 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 MIR526A1-201ENST00000384897 85 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 MIR942-201ENST00000401111 86 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 MTCYBP4-201ENST00000401524 249 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 AC018865.2-201ENST00000423631 129 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 EIF1P2-201ENST00000428233 350 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 MTATP6P17-201ENST00000431030 672 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 Z98949.2-201ENST00000440996 144 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 AL137792.2-201ENST00000443484 235 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 AC245047.8-201ENST00000456455 284 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 AL049830.1-201ENST00000468034 425 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 RNU6-864P-201ENST00000516256 108 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 AC093023.1-201ENST00000547375 507 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 MIR6515-201ENST00000619843 57 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 AC024614.3-201ENST00000637860 256 ntBASIC0.67□□□□□ -2.3
ECHDC3Q96DC8 RNU6-222P-201ENST00000362438 107 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.267-201ENST00000364679 109 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 RNU6-1145P-201ENST00000384246 107 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 USP9YP16-201ENST00000430287 407 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 AC098826.2-201ENST00000452011 651 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 USP9YP23-201ENST00000455085 407 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 LINC01399-202ENST00000458450 244 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 RNU7-90P-201ENST00000459216 62 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 RNU6-107P-201ENST00000516643 102 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 AC090617.3-201ENST00000573670 475 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 MIR5701-3-201ENST00000578890 82 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 MIR4273-201ENST00000582824 84 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 MIR5701-1-201ENST00000585138 82 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 MIR5701-2-201ENST00000615634 82 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 CASC19-280ENST00000642102 1351 ntBASIC0.66□□□□□ -2.3
ECHDC3Q96DC8 Y_RNA.106-201ENST00000363189 100 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 RNU6-833P-201ENST00000363486 107 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 Y_RNA.354-201ENST00000365448 111 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 RNU6-842P-201ENST00000384269 107 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 SNORD116-13-201ENST00000384408 92 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1001P-201ENST00000411265 100 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 MTND3P21-201ENST00000433774 331 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 AC104332.1-201ENST00000440471 797 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 SNORD5.1-201ENST00000458800 75 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 AP003716.2-201ENST00000528260 108 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 AC100812.1-201ENST00000607622 580 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 AL357075.2-201ENST00000614906 189 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 AC022709.1-201ENST00000615967 87 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 MIR7111-201ENST00000619751 72 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 AC090617.10-201ENST00000624308 134 ntBASIC0.65□□□□□ -2.31
ECHDC3Q96DC8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 RNU4-41P-201ENST00000364426 143 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1148P-201ENST00000410992 104 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 MTND1P17-201ENST00000448961 204 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 AC074133.1-201ENST00000515696 183 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1291P-201ENST00000516591 104 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 RNU6-1088P-201ENST00000516850 104 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 Y_RNA.706-201ENST00000516933 99 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 AC022868.1-201ENST00000517767 391 ntBASIC0.64□□□□□ -2.31
ECHDC3Q96DC8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms