Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC009831.4-201ENST00000620744 325 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 AP000553.5-201ENST00000641933 54 ntBASIC1.93□□□□□ -2.1
RAB40AQ8WXH6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 RNU4-90P-201ENST00000362773 141 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 U8.2-201ENST00000363156 134 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.329-201ENST00000365209 107 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.459-201ENST00000384251 102 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 RNU11-5P-201ENST00000391216 129 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 OOSP1P1-201ENST00000423265 274 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 POLR2KP2-201ENST00000438155 177 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 LINC01399-202ENST00000458450 244 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 MTATP8P1-201ENST00000467115 207 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 RPS26P45-201ENST00000471748 340 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 RPS29P21-201ENST00000496272 170 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 AL163195.1-201ENST00000496941 348 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 RNU6-635P-201ENST00000516651 102 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 RNU7-128P-201ENST00000517247 62 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 RPL21P9-201ENST00000556149 474 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 AC073413.2-201ENST00000604332 360 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 U6.108-201ENST00000637764 58 ntBASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
RAB40AQ8WXH6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 SNORD81.1-201ENST00000363064 77 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.286-201ENST00000364813 102 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 RNU6-806P-201ENST00000365147 105 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 RNU6-376P-201ENST00000384731 106 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 RNU6-713P-201ENST00000384761 107 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 RNU2-61P-201ENST00000411069 191 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 RN7SKP192-201ENST00000411291 327 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 AC009310.1-201ENST00000414414 451 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 MTND2P23-201ENST00000422990 651 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 AC024067.1-201ENST00000426199 223 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 AC136443.5-201ENST00000603741 370 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 AC116312.1-201ENST00000606841 314 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 AC127459.3-201ENST00000624328 466 ntBASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAB40AQ8WXH6 Y_RNA.64-201ENST00000362845 102 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 SNORA63D-201ENST00000364359 132 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.383-201ENST00000383855 97 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 RNU6-102P-201ENST00000384485 104 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.581-201ENST00000391017 97 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 RNU6-1109P-201ENST00000391187 107 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 RNU6-710P-201ENST00000410424 105 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 RPL21P38-201ENST00000418090 167 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 DYNLT3P2-201ENST00000442517 295 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 AL118496.2-201ENST00000448300 230 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 AL021397.1-201ENST00000451806 248 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 RNU7-94P-201ENST00000459576 63 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 RNU6-496P-201ENST00000516145 99 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 RNU6-1337P-201ENST00000516525 95 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 SNORA31.17-201ENST00000516953 127 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 AP003733.2-201ENST00000529409 171 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 MIR5002-201ENST00000584713 97 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 DEFB117-201ENST00000602356 141 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 PRR13P7-201ENST00000605538 430 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
RAB40AQ8WXH6 AL356292.1-201ENST00000283110 373 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.26-201ENST00000362539 101 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 HSPE1P13-201ENST00000451143 297 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 HSPE1P25-201ENST00000455484 251 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 RNU6-1045P-201ENST00000516321 107 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 MIR6873-201ENST00000622788 63 ntBASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40AQ8WXH6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.222-201ENST00000364264 102 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 RNU6-117P-201ENST00000365415 107 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 MIR548F4-201ENST00000408515 105 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 275.6 ms