Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RPL26P26-201ENST00000480251 434 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 AP001025.1-201ENST00000486139 332 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 RNU6-567P-201ENST00000516746 107 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 Z83818.1-201ENST00000603584 150 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.07□□□□□ -2.08
SNED1Q8TER0 AL157777.2-201ENST00000258070 137 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 Y_RNA.230-201ENST00000364348 109 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 RNU6-514P-201ENST00000384208 107 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 RNU6-662P-201ENST00000384253 104 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 RNU6-748P-201ENST00000384648 107 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 SNORA19-201ENST00000384737 128 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 SNORA40.9-201ENST00000515895 93 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.06□□□□□ -2.08
SNED1Q8TER0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.06□□□□□ -2.08
SNED1Q8TER0 MIR4423-201ENST00000580922 80 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.06□□□□□ -2.08
SNED1Q8TER0 AC005176.2-201ENST00000596933 147 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 BX248123.2-201ENST00000606318 124 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 MIR502-201ENST00000606349 86 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 AL512598.1-201ENST00000610158 273 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 AC010999.1-201ENST00000611856 324 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 U4atac.1-201ENST00000618345 95 ntBASIC2.06□□□□□ -2.08
SNED1Q8TER0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SNED1Q8TER0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.06□□□□□ -2.08
SNED1Q8TER0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNED1Q8TER0 RNU6-1285P-201ENST00000363480 105 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 RNA5SP325-201ENST00000363756 130 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 RNU6-873P-201ENST00000363833 107 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 SNORD115-8-201ENST00000363856 82 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 RNU4-13P-201ENST00000364019 141 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 SNORD115-38-201ENST00000365037 82 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 Y_RNA.383-201ENST00000383855 97 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 Y_RNA.570-201ENST00000384750 101 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 PCNPP3-201ENST00000393579 471 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 RNU2-61P-201ENST00000411069 191 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 AC138623.1-201ENST00000418060 216 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 RPL30P4-201ENST00000429309 333 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.05□□□□□ -2.08
SNED1Q8TER0 MTCO1P5-201ENST00000433573 344 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 POLR2KP2-201ENST00000438155 177 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 COX6CP14-201ENST00000469580 174 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 SNORD116-28-201ENST00000516123 91 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 SNORA27.4-201ENST00000516650 95 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 RNU6-861P-201ENST00000516745 106 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 ACA59.2-201ENST00000517061 156 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.05□□□□□ -2.08
SNED1Q8TER0 AC121758.2-201ENST00000553271 193 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.05□□□□□ -2.08
SNED1Q8TER0 MIR3133-201ENST00000583157 78 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.05□□□□□ -2.08
SNED1Q8TER0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.05□□□□□ -2.08
SNED1Q8TER0 MIR6895-201ENST00000613497 78 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.05□□□□□ -2.08
SNED1Q8TER0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNED1Q8TER0 ZNF204P-201ENST00000416749 2397 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SNED1Q8TER0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SNED1Q8TER0 MIR410-201ENST00000362222 80 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 RNU5F-3P-201ENST00000363767 117 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 Y_RNA.179-201ENST00000363844 90 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 Y_RNA.275-201ENST00000364726 110 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 SNORA72.2-201ENST00000365028 127 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 RNA5SP240-201ENST00000365355 128 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 Y_RNA.418-201ENST00000384029 102 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 RNU6-187P-201ENST00000384139 106 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 Y_RNA.446-201ENST00000384178 104 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 RNU6-493P-201ENST00000391321 108 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 RNU2-63P-201ENST00000410792 194 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.04□□□□□ -2.08
SNED1Q8TER0 AC019205.3-201ENST00000424573 156 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 AC009238.1-201ENST00000442165 424 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.04□□□□□ -2.08
SNED1Q8TER0 AC009237.6-201ENST00000446969 424 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.04□□□□□ -2.08
SNED1Q8TER0 RPL23AP3-201ENST00000453844 468 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.04□□□□□ -2.08
SNED1Q8TER0 AC022559.1-201ENST00000520905 205 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.04□□□□□ -2.08
SNED1Q8TER0 RPL21P9-201ENST00000556149 474 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 MIR5739-201ENST00000619803 80 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.04□□□□□ -2.08
SNED1Q8TER0 RBBP8P1-201ENST00000449447 1844 ntBASIC2.04□□□□□ -2.08
SNED1Q8TER0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SNED1Q8TER0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.04□□□□□ -2.08
SNED1Q8TER0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.08
SNED1Q8TER0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNED1Q8TER0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNED1Q8TER0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNED1Q8TER0 RNU6-1020P-201ENST00000363684 107 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 RNU6-682P-201ENST00000363843 106 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 RNA5SP125-201ENST00000364843 120 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 RNU6-47P-201ENST00000383866 107 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 RNU6-622P-201ENST00000384272 103 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 RNU6-1289P-201ENST00000384431 106 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 MIR1323-201ENST00000408090 73 ntBASIC2.03□□□□□ -2.08
SNED1Q8TER0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.03□□□□□ -2.08
SNED1Q8TER0 MRPS10P1-201ENST00000448483 130 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms