Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNORA54-201ENST00000384281 123 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-975P-201ENST00000384296 105 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 Y_RNA.544-201ENST00000384650 113 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-440P-201ENST00000390882 105 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 RNU2-32P-201ENST00000411193 191 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 COX6CP6-201ENST00000490840 228 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-126P-201ENST00000516685 103 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 MIR4662B-201ENST00000579498 81 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 MIR4753-201ENST00000585119 83 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 AF117829.1-206ENST00000621883 3802 ntBASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHKBP1Q8TBC3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-805P-201ENST00000365643 106 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-1113P-201ENST00000384348 107 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 RNA5SP354-201ENST00000391247 136 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-57P-201ENST00000411348 103 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 AC063976.3-201ENST00000426849 329 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 AC025750.2-201ENST00000442609 450 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 OR9P1P-201ENST00000496431 281 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-970P-201ENST00000516312 107 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 AC079598.5-201ENST00000547460 117 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 AL442128.1-201ENST00000615151 90 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 AC002064.3-201ENST00000623448 346 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 AC006435.5-201ENST00000624486 112 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 AL137790.1-201ENST00000634283 177 ntBASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHKBP1Q8TBC3 AP003122.5-201ENST00000527668 3766 ntBASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 SNORA1-201ENST00000384107 130 ntBASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-750P-201ENST00000390946 107 ntBASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 AL590004.2-201ENST00000404787 371 ntBASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 HMGN2P7-201ENST00000456186 273 ntBASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 RNU7-14P-201ENST00000459331 62 ntBASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 RNU6-113P-201ENST00000516653 101 ntBASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 MIR3129-201ENST00000581095 76 ntBASIC3.28□□□□□ -1.88
SHKBP1Q8TBC3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 Y_RNA.49-201ENST00000362714 112 ntBASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 MIR1289-1-201ENST00000408836 144 ntBASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 AC018634.1-201ENST00000437554 401 ntBASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 AC107083.1-201ENST00000439643 279 ntBASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 RPS4XP11-201ENST00000446897 772 ntBASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 AC016717.1-201ENST00000448918 286 ntBASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 ATP5EP1-201ENST00000510257 156 ntBASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 MIR622-201ENST00000638396 96 ntBASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.27□□□□□ -1.89
SHKBP1Q8TBC3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 SNORA63.5-201ENST00000363548 123 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 RNU6-573P-201ENST00000383938 106 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 RNY1P7-201ENST00000384743 110 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 RPS3AP1-201ENST00000413190 320 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 UBE2DNL-203ENST00000474922 222 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 MIR449C-201ENST00000516047 92 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 RN7SKP12-201ENST00000516275 143 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 AC107294.3-201ENST00000609211 526 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 AL137067.1-201ENST00000615933 120 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHKBP1Q8TBC3 AL365361.1-201ENST00000566942 3481 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 AL672296.1-201ENST00000427780 2158 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 AL589743.1-201ENST00000551932 2712 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 Y_RNA.366-201ENST00000365540 102 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 RNU6-1292P-201ENST00000383856 107 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 SNORD15B-201ENST00000384714 146 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 AC007064.1-201ENST00000412238 351 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 RPL30P4-201ENST00000429309 333 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 RNU7-23P-201ENST00000459465 62 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 AP002884.2-201ENST00000471647 395 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 RPL36AP48-201ENST00000485521 314 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 RNU6-109P-201ENST00000516364 107 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 RNU6-184P-201ENST00000516514 107 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 Y_RNA.685-201ENST00000516532 108 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms