Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNU4-10P-201ENST00000364383 140 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 MIR626-201ENST00000385032 94 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 AL355796.1-201ENST00000406706 323 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 RNU6-855P-201ENST00000410395 104 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 RN7SL297P-201ENST00000483161 293 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 ATP5EP1-201ENST00000510257 156 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 RN7SKP164-201ENST00000516138 266 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 AC021269.2-201ENST00000532318 330 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 AC008739.2-201ENST00000597006 317 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 AL713866.2-201ENST00000603579 219 ntBASIC2.57□□□□□ -2
SLC44A3Q8N4M1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC44A3Q8N4M1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SLC44A3Q8N4M1 RNU6-486P-201ENST00000363116 107 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 RNU6-899P-201ENST00000363947 107 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 Y_RNA.572-201ENST00000384757 98 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 MIR1283-1-201ENST00000408494 87 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 RNA5SP492-201ENST00000411330 114 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 MICF-203ENST00000432679 129 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 RPL23AP7-203ENST00000449021 469 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 RNU7-141P-201ENST00000459304 62 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 AC108210.2-201ENST00000503681 201 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 SEM1P1-201ENST00000506694 209 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 AC234781.5-201ENST00000508429 271 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.56□□□□□ -2
SLC44A3Q8N4M1 MIR449C-201ENST00000516047 92 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 AC018630.3-201ENST00000542637 96 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SLC44A3Q8N4M1 MIR1273D-201ENST00000577266 86 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 AL670379.2-201ENST00000604983 252 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 AC069294.1-201ENST00000608397 350 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SLC44A3Q8N4M1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.56□□□□□ -2
SLC44A3Q8N4M1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SLC44A3Q8N4M1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.56□□□□□ -2
SLC44A3Q8N4M1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SLC44A3Q8N4M1 RNU6-818P-201ENST00000364837 108 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 Y_RNA.341-201ENST00000365341 102 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 Y_RNA.400-201ENST00000383963 111 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 MIR526A2-201ENST00000390198 65 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 RNU6-131P-201ENST00000391144 107 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 RNA5SP354-201ENST00000391247 136 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 SCARNA8-201ENST00000515924 131 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 RNU7-121P-201ENST00000516604 62 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.55□□□□□ -2
SLC44A3Q8N4M1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.55□□□□□ -2
SLC44A3Q8N4M1 MIR3684-201ENST00000579779 74 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 AC090616.3-201ENST00000582184 217 ntBASIC2.55□□□□□ -2
SLC44A3Q8N4M1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.55□□□□□ -2
SLC44A3Q8N4M1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.55□□□□□ -2
SLC44A3Q8N4M1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SLC44A3Q8N4M1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.55□□□□□ -2
SLC44A3Q8N4M1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
SLC44A3Q8N4M1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SLC44A3Q8N4M1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SLC44A3Q8N4M1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SLC44A3Q8N4M1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.54□□□□□ -2
SLC44A3Q8N4M1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 RNU6-103P-201ENST00000363686 107 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 RNU6-234P-201ENST00000365229 104 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 RNU6-449P-201ENST00000383914 107 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 SNORA8.3-201ENST00000384679 139 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 RNU6-578P-201ENST00000390980 103 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 RNU6-482P-201ENST00000391068 107 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 MIR873-201ENST00000401120 77 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 EBAG9P1-201ENST00000418955 543 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.54□□□□□ -2
SLC44A3Q8N4M1 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.54□□□□□ -2
SLC44A3Q8N4M1 SNORA70.12-201ENST00000516084 153 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 RNA5SP281-201ENST00000516504 135 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.54□□□□□ -2
SLC44A3Q8N4M1 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 MIR4744-201ENST00000581563 82 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 AP001485.1-201ENST00000604799 199 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 AC046143.2-201ENST00000609789 160 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 UCA1.1-201ENST00000620952 75 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 AC012640.5-201ENST00000623897 319 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 AC090517.3-201ENST00000625170 141 ntBASIC2.54□□□□□ -2
SLC44A3Q8N4M1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
SLC44A3Q8N4M1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC44A3Q8N4M1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
SLC44A3Q8N4M1 SNORD114-1-201ENST00000362705 72 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 RNU1-109P-201ENST00000383960 147 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 SNORA20B-201ENST00000384220 132 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 Y_RNA.568-201ENST00000384742 113 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 RNU6-239P-201ENST00000390990 99 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 MIR300-201ENST00000401138 83 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 RPL30P4-201ENST00000429309 333 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 AL603825.1-201ENST00000438481 80 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.53□□□□□ -2
SLC44A3Q8N4M1 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 RPS20P10-201ENST00000451209 253 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 AC016925.1-201ENST00000458303 298 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms