Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC116Q8IYX3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 RNU6-442P-201ENST00000383968 104 ntBASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 RNU6-1124P-201ENST00000384169 107 ntBASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 SNORA3.3-201ENST00000408712 125 ntBASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 RNA5SP225-201ENST00000410874 135 ntBASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 AL161788.1-201ENST00000441805 169 ntBASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 RNA5SP57-201ENST00000459463 123 ntBASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 RN7SL323P-201ENST00000494712 295 ntBASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 SNORD59.2-201ENST00000516873 68 ntBASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.59□□□□□ -1.83
CCDC116Q8IYX3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.59□□□□□ -1.84
CCDC116Q8IYX3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.59□□□□□ -1.84
CCDC116Q8IYX3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 Y_RNA.290-201ENST00000364879 114 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 Y_RNA.440-201ENST00000384120 114 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 RNU1-89P-201ENST00000384592 164 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 Y_RNA.547-201ENST00000384654 119 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 MIR218-1-201ENST00000384999 110 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 GOT2P5-201ENST00000433995 546 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 AC099677.2-201ENST00000436385 175 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 SNORA84-201ENST00000459229 133 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 snoU13.22-201ENST00000459428 104 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 RNU7-6P-201ENST00000516845 62 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 AC034105.4-201ENST00000568304 277 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 MIR486-1-201ENST00000612171 68 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 U6.108-201ENST00000637764 58 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 FAM35CP-201ENST00000554755 2470 ntBASIC3.58□□□□□ -1.84
CCDC116Q8IYX3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 SNORA1B-201ENST00000362535 133 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 SNORD14E-201ENST00000364009 85 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 AL445646.1-201ENST00000431784 216 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 AL445687.1-201ENST00000439946 251 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 AL049830.1-201ENST00000468034 425 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 RNA5SP208-201ENST00000516156 78 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 RNU2-35P-201ENST00000516446 142 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 MIR4429-201ENST00000580105 73 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 MIR4286-201ENST00000580651 93 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 AL137849.1-201ENST00000604767 169 ntBASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC116Q8IYX3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 SNORD68-201ENST00000363214 84 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 SNORA33-201ENST00000363664 130 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 RNU6-268P-201ENST00000364174 107 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 MIR30B-201ENST00000384850 88 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 Y_RNA.601-201ENST00000410500 113 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 RPL23AP67-201ENST00000465341 474 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 RNU6-1041P-201ENST00000516254 102 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 RNA5SP164-201ENST00000516533 110 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 RNU1-142P-201ENST00000516682 145 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 RNA5SP143-201ENST00000516936 115 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 AP002004.2-201ENST00000531656 154 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 MIR3683-201ENST00000580847 82 ntBASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.56□□□□□ -1.84
CCDC116Q8IYX3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 RNU1-23P-201ENST00000363361 144 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 Y_RNA.351-201ENST00000365436 96 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 RNU6-938P-201ENST00000411285 103 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 SNRPGP14-201ENST00000435400 219 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 AC022137.1-201ENST00000483735 151 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 SCARNA14-201ENST00000516903 136 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 SNORA18.7-201ENST00000516910 131 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 CYCSP30-201ENST00000546447 172 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 SNORA62.6-201ENST00000606322 83 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 MIR5739-201ENST00000619803 80 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 AC110079.1-202ENST00000635213 138 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 MIR3202-2-201ENST00000635980 79 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 MIR338-201ENST00000636369 67 ntBASIC3.55□□□□□ -1.84
CCDC116Q8IYX3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms