Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.85□□□□□ -2.27
CDKL3Q8IVW4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 RNY1-201ENST00000364228 113 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 MIR329-1-201ENST00000385028 80 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 MIR660-201ENST00000385235 97 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 MIR190B-201ENST00000401119 79 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 MIR548F1-201ENST00000408667 84 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 EIF1P2-201ENST00000428233 350 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 UQCRBP2-201ENST00000447827 297 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 RNU7-87P-201ENST00000459343 62 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 RNU6-329P-201ENST00000459618 107 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 AC026782.1-201ENST00000512952 449 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 AC097462.1-201ENST00000514125 324 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 RNU6-718P-201ENST00000516166 105 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 RNU7-172P-201ENST00000517125 64 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 MIR4778-201ENST00000577635 80 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 AC018638.8-201ENST00000588755 281 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 AC018462.2-201ENST00000605375 395 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 AC005014.2-201ENST00000607795 599 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 MIR6079-201ENST00000635807 62 ntBASIC0.84□□□□□ -2.27
CDKL3Q8IVW4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.86-201ENST00000363020 111 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 RNU4-40P-201ENST00000364351 143 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 RNU4-76P-201ENST00000364509 141 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 RNU6-1264P-201ENST00000383891 107 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 SNORA20B-201ENST00000384220 132 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 RNU6-700P-201ENST00000391043 107 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 AL355796.1-201ENST00000406706 323 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 ELOCP21-201ENST00000412558 336 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 MTCO3P19-201ENST00000415864 321 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 AC018710.1-201ENST00000506509 158 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 RNU6-1016P-201ENST00000516689 94 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 RNU6-922P-201ENST00000516753 99 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 SNORA28-201ENST00000606769 126 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 AL357075.2-201ENST00000614906 189 ntBASIC0.83□□□□□ -2.28
CDKL3Q8IVW4 MIR373-201ENST00000362273 69 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.2-201ENST00000362330 96 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 RNU6-874P-201ENST00000362390 105 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 RNA5SP361-201ENST00000362686 118 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.265-201ENST00000364677 108 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 RNU6-407P-201ENST00000365280 104 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.364-201ENST00000365532 101 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.466-201ENST00000384294 113 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 SNORD41-201ENST00000386967 70 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 RNU11-5P-201ENST00000391216 129 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 RNU6-510P-201ENST00000391239 108 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 MIR548F5-201ENST00000408421 86 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.594-201ENST00000410373 140 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 AC074085.1-201ENST00000413598 418 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 RN7SKP49-201ENST00000516675 260 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 AP002001.1-203ENST00000534002 267 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 RPL21P9-201ENST00000556149 474 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 AL513534.2-201ENST00000603836 250 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 AC073544.1-201ENST00000600110 1595 ntBASIC0.82□□□□□ -2.28
CDKL3Q8IVW4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 RNY1P16-201ENST00000363063 111 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.112-201ENST00000363250 102 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 RNU6-879P-201ENST00000364328 108 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 RNU6-1145P-201ENST00000384246 107 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.557-201ENST00000384680 107 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 MTCYBP4-201ENST00000401524 249 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 MIR548K-201ENST00000408406 116 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 MIR1277-201ENST00000408536 78 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 RNU6-1050P-201ENST00000410388 107 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 AC018865.2-201ENST00000423631 129 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 RAB28P5-201ENST00000427490 651 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 CALM2P4-201ENST00000430810 426 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 AL353997.1-201ENST00000432936 108 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 RPS3AP52-201ENST00000435639 297 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 snoU13.25-201ENST00000458945 104 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 AC091021.1-201ENST00000468051 388 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 SNORA31.4-201ENST00000516049 129 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 Y_RNA.670-201ENST00000516255 105 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 RNA5SP168-201ENST00000516642 112 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 RNU2-56P-201ENST00000516826 190 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 SNORA70.22-201ENST00000517160 124 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 AC105029.1-201ENST00000520250 669 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 MIR3684-201ENST00000579779 74 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 AC080078.2-201ENST00000603766 501 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 AC104260.1-201ENST00000616660 539 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 MIR6515-201ENST00000619843 57 ntBASIC0.81□□□□□ -2.28
CDKL3Q8IVW4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms