Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 BX510359.1-201ENST00000456973 237 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 RN7SL499P-201ENST00000481141 276 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 RN7SL20P-201ENST00000488827 297 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 RPS29P21-201ENST00000496272 170 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 RN7SKP179-201ENST00000516126 217 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 AC090049.2-201ENST00000550377 109 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 AC073346.2-201ENST00000624724 2058 ntBASIC2.96□□□□□ -1.94
RNF111Q6ZNA4 U8.1-201ENST00000362843 134 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 AL357134.1-201ENST00000445848 426 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 AC023449.1-201ENST00000454464 154 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 SEM1P1-201ENST00000506694 209 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 SNORA4.4-201ENST00000515921 135 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 SNORD77.4-201ENST00000516158 81 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 AC011604.1-201ENST00000545978 196 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.757-201ENST00000578934 114 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 MIR2681-201ENST00000581814 105 ntBASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
RNF111Q6ZNA4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 RNU6-834P-201ENST00000362367 110 ntBASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 SNORA48.8-201ENST00000391324 134 ntBASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 SNORA11.1-201ENST00000408133 129 ntBASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 AC023141.11-201ENST00000508864 202 ntBASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 AL160236.1-201ENST00000556317 195 ntBASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 MIR5195-201ENST00000583555 115 ntBASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RNF111Q6ZNA4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 RNU6-153P-201ENST00000364422 104 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.563-201ENST00000384707 108 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 RNU6-1064P-201ENST00000410626 104 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 AL158823.1-201ENST00000418441 478 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 AC123900.1-201ENST00000420390 96 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 HMGN2P34-201ENST00000437647 269 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 SNORD11-201ENST00000459124 84 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 RN7SL504P-201ENST00000494496 287 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 AC093259.1-201ENST00000509755 300 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 MIR5004-201ENST00000579078 107 ntBASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF111Q6ZNA4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 SNORA68.1-201ENST00000364537 132 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 RNU6-429P-201ENST00000384582 108 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 SNORD15B-201ENST00000384714 146 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 MLLT10P1-201ENST00000418346 262 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 AC060773.1-201ENST00000421698 310 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 CYP2C59P-201ENST00000457790 269 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 RPS29P12-201ENST00000460178 152 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 RNA5SP153-201ENST00000516498 76 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.692-201ENST00000516627 105 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 RNU6-856P-201ENST00000516959 98 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.712-201ENST00000517011 92 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 SNORA70.24-201ENST00000517233 118 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 U2.20-201ENST00000613956 192 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 MIR6129-201ENST00000616087 109 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 MIR3651-201ENST00000630427 90 ntBASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF111Q6ZNA4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 MIR340-201ENST00000362125 95 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 Y_RNA.332-201ENST00000365271 113 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 SNORA7.4-201ENST00000384249 137 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 AL513477.1-202ENST00000417061 214 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 AC063976.3-201ENST00000426849 329 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 TRIAP1P1-201ENST00000427062 225 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 AP001486.1-201ENST00000463339 476 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 RNU6-772P-201ENST00000516042 105 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 RNU7-149P-201ENST00000516739 59 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 AC073413.2-201ENST00000604332 360 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 AL161756.2-201ENST00000604597 246 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 YPEL5P2-201ENST00000605553 359 ntBASIC2.91□□□□□ -1.94
RNF111Q6ZNA4 Pinc.1-201ENST00000616452 154 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms